Protein–RNA interactions for Protein: Q9Y3C8

UFC1, Ubiquitin-fold modifier-conjugating enzyme 1, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFC1Q9Y3C8 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 CICP17-201ENST00000418553 2377 ntBASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 AR-208ENST00000612452 10676 ntTSL 5 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 MIR663B-201ENST00000408361 115 ntBASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 AC106794.1-201ENST00000506935 792 ntBASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 AC104982.3-201ENST00000581995 514 ntBASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 AC008805.1-201ENST00000590892 364 ntBASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 AC007663.3-201ENST00000609632 465 ntBASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 TCAM1P-207ENST00000485295 1537 ntBASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 AC011498.7-201ENST00000624986 2027 ntBASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 ADK-205ENST00000539909 1866 ntTSL 2 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 AC005562.1-201ENST00000583030 3219 ntBASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 AC011481.3-201ENST00000623895 5594 ntBASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 FAS-202ENST00000352159 1722 ntTSL 5 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
UFC1Q9Y3C8 DGCR9-201ENST00000609630 2415 ntBASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 TMBIM7P-202ENST00000641474 1516 ntBASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 GOLGA2P4-201ENST00000441462 777 ntBASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
UFC1Q9Y3C8 CD74-212ENST00000524315 584 ntTSL 5 BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms