Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 AP002761.4-201ENST00000565433 3361 ntBASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 AL122018.1-201ENST00000446607 2310 ntBASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 RCC2P1-201ENST00000452257 1476 ntBASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 AC003686.1-201ENST00000550956 1034 ntBASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 AC244157.2-201ENST00000616239 1006 ntBASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 AC008687.7-202ENST00000637404 953 ntBASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 Z98259.2-201ENST00000641583 609 ntBASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
POLR2J2Q9GZM3 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 AL359845.1-201ENST00000458202 1648 ntBASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 AC100850.1-201ENST00000506768 649 ntBASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 AP006547.1-201ENST00000563435 692 ntBASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 IGHV3-72-202ENST00000621503 303 ntBASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.11□□□□□ -0.31
POLR2J2Q9GZM3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms