Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.59□□□□□ -0.39
GFRA1P56159 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GFRA1P56159 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
GFRA1P56159 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
GFRA1P56159 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.59□□□□□ -0.39
GFRA1P56159 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GFRA1P56159 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.59□□□□□ -0.39
GFRA1P56159 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
GFRA1P56159 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GFRA1P56159 RNVU1-8-201ENST00000364272 125 ntBASIC12.59□□□□□ -0.39
GFRA1P56159 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
GFRA1P56159 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GFRA1P56159 RPL3P2-204ENST00000413027 1203 ntBASIC12.59□□□□□ -0.39
GFRA1P56159 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC12.59□□□□□ -0.39
GFRA1P56159 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC12.59□□□□□ -0.39
GFRA1P56159 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GFRA1P56159 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC12.59□□□□□ -0.39
GFRA1P56159 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC12.59□□□□□ -0.39
GFRA1P56159 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC12.59□□□□□ -0.39
GFRA1P56159 DPY19L2P5-201ENST00000456300 331 ntBASIC12.59□□□□□ -0.39
GFRA1P56159 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC12.59□□□□□ -0.39
GFRA1P56159 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
GFRA1P56159 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC12.59□□□□□ -0.39
GFRA1P56159 AC068867.1-201ENST00000559855 150 ntBASIC12.59□□□□□ -0.39
GFRA1P56159 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC12.59□□□□□ -0.39
GFRA1P56159 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
GFRA1P56159 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.59□□□□□ -0.39
GFRA1P56159 AL359091.4-201ENST00000610052 409 ntBASIC12.59□□□□□ -0.39
GFRA1P56159 CR392039.2-201ENST00000623182 509 ntBASIC12.59□□□□□ -0.39
GFRA1P56159 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
GFRA1P56159 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GFRA1P56159 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.59□□□□□ -0.39
GFRA1P56159 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
GFRA1P56159 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
GFRA1P56159 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GFRA1P56159 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GFRA1P56159 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GFRA1P56159 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GFRA1P56159 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GFRA1P56159 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
GFRA1P56159 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC12.59□□□□□ -0.39
GFRA1P56159 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
GFRA1P56159 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
GFRA1P56159 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
GFRA1P56159 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
GFRA1P56159 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.58□□□□□ -0.39
GFRA1P56159 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
GFRA1P56159 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 MSANTD2P1-201ENST00000445341 1368 ntBASIC12.58□□□□□ -0.4
GFRA1P56159 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
GFRA1P56159 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.58□□□□□ -0.4
GFRA1P56159 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
GFRA1P56159 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
GFRA1P56159 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.58□□□□□ -0.4
GFRA1P56159 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.58□□□□□ -0.4
GFRA1P56159 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.58□□□□□ -0.4
GFRA1P56159 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.58□□□□□ -0.4
GFRA1P56159 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
GFRA1P56159 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.58□□□□□ -0.4
GFRA1P56159 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.58□□□□□ -0.4
GFRA1P56159 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC12.58□□□□□ -0.4
GFRA1P56159 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.58□□□□□ -0.4
GFRA1P56159 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.58□□□□□ -0.4
GFRA1P56159 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 AC104784.1-201ENST00000473096 294 ntBASIC12.58□□□□□ -0.4
GFRA1P56159 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC12.58□□□□□ -0.4
GFRA1P56159 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC12.58□□□□□ -0.4
GFRA1P56159 HINT1-205ENST00000508488 703 ntTSL 2 BASIC12.58□□□□□ -0.4
GFRA1P56159 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
GFRA1P56159 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 MIR4649-201ENST00000582839 64 ntBASIC12.58□□□□□ -0.4
GFRA1P56159 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
GFRA1P56159 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC12.58□□□□□ -0.4
GFRA1P56159 AL049840.2-201ENST00000602722 535 ntBASIC12.58□□□□□ -0.4
GFRA1P56159 AL031673.1-201ENST00000611460 466 ntBASIC12.58□□□□□ -0.4
GFRA1P56159 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
GFRA1P56159 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
GFRA1P56159 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
GFRA1P56159 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
GFRA1P56159 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.58□□□□□ -0.4
GFRA1P56159 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
GFRA1P56159 AL928921.2-201ENST00000641325 2442 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms