Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Upk1bQ9Z2C6 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Upk1bQ9Z2C6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Upk1bQ9Z2C6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Upk1bQ9Z2C6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Upk1bQ9Z2C6 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Upk1bQ9Z2C6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Upk1bQ9Z2C6 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Upk1bQ9Z2C6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Upk1bQ9Z2C6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Upk1bQ9Z2C6 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Upk1bQ9Z2C6 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Upk1bQ9Z2C6 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Upk1bQ9Z2C6 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Upk1bQ9Z2C6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Upk1bQ9Z2C6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.64■□□□□ 0.57
Upk1bQ9Z2C6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Upk1bQ9Z2C6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Upk1bQ9Z2C6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.63■□□□□ 0.57
Upk1bQ9Z2C6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Upk1bQ9Z2C6 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Upk1bQ9Z2C6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.63■□□□□ 0.57
Upk1bQ9Z2C6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Upk1bQ9Z2C6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Upk1bQ9Z2C6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Upk1bQ9Z2C6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Upk1bQ9Z2C6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Upk1bQ9Z2C6 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.62■□□□□ 0.57
Upk1bQ9Z2C6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Upk1bQ9Z2C6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.62■□□□□ 0.57
Upk1bQ9Z2C6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Upk1bQ9Z2C6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Upk1bQ9Z2C6 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Upk1bQ9Z2C6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Upk1bQ9Z2C6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Upk1bQ9Z2C6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Upk1bQ9Z2C6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Upk1bQ9Z2C6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.61■□□□□ 0.57
Upk1bQ9Z2C6 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.61■□□□□ 0.57
Upk1bQ9Z2C6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Upk1bQ9Z2C6 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Upk1bQ9Z2C6 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Upk1bQ9Z2C6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Upk1bQ9Z2C6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Upk1bQ9Z2C6 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1bQ9Z2C6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1bQ9Z2C6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1bQ9Z2C6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1bQ9Z2C6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1bQ9Z2C6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1bQ9Z2C6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1bQ9Z2C6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1bQ9Z2C6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1bQ9Z2C6 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1bQ9Z2C6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Upk1bQ9Z2C6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Upk1bQ9Z2C6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.59■□□□□ 0.57
Upk1bQ9Z2C6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Upk1bQ9Z2C6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Upk1bQ9Z2C6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Upk1bQ9Z2C6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Upk1bQ9Z2C6 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.58■□□□□ 0.57
Upk1bQ9Z2C6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.58■□□□□ 0.57
Upk1bQ9Z2C6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Upk1bQ9Z2C6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Upk1bQ9Z2C6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.58■□□□□ 0.56
Upk1bQ9Z2C6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Upk1bQ9Z2C6 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Upk1bQ9Z2C6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Upk1bQ9Z2C6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Upk1bQ9Z2C6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.56
Upk1bQ9Z2C6 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Upk1bQ9Z2C6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Upk1bQ9Z2C6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Upk1bQ9Z2C6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.57■□□□□ 0.56
Upk1bQ9Z2C6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Upk1bQ9Z2C6 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Upk1bQ9Z2C6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Upk1bQ9Z2C6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Upk1bQ9Z2C6 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Upk1bQ9Z2C6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upk1bQ9Z2C6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Upk1bQ9Z2C6 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.56■□□□□ 0.56
Upk1bQ9Z2C6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upk1bQ9Z2C6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Upk1bQ9Z2C6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.56■□□□□ 0.56
Upk1bQ9Z2C6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Upk1bQ9Z2C6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.56■□□□□ 0.56
Upk1bQ9Z2C6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.56■□□□□ 0.56
Upk1bQ9Z2C6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Upk1bQ9Z2C6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upk1bQ9Z2C6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upk1bQ9Z2C6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.55■□□□□ 0.56
Upk1bQ9Z2C6 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upk1bQ9Z2C6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.55■□□□□ 0.56
Upk1bQ9Z2C6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upk1bQ9Z2C6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.55■□□□□ 0.56
Upk1bQ9Z2C6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Upk1bQ9Z2C6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Upk1bQ9Z2C6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms