Protein–RNA interactions for Protein: Q9EQ52

Vmn1r48, Vomeronasal type-1 receptor 48, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r48Q9EQ52 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Vmn1r48Q9EQ52 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vmn1r48Q9EQ52 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vmn1r48Q9EQ52 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Vmn1r48Q9EQ52 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Vmn1r48Q9EQ52 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Vmn1r48Q9EQ52 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vmn1r48Q9EQ52 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Vmn1r48Q9EQ52 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vmn1r48Q9EQ52 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.33■□□□□ 0.37
Vmn1r48Q9EQ52 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vmn1r48Q9EQ52 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Vmn1r48Q9EQ52 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Vmn1r48Q9EQ52 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vmn1r48Q9EQ52 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Vmn1r48Q9EQ52 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vmn1r48Q9EQ52 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Vmn1r48Q9EQ52 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.33■□□□□ 0.36
Vmn1r48Q9EQ52 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Vmn1r48Q9EQ52 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vmn1r48Q9EQ52 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Vmn1r48Q9EQ52 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vmn1r48Q9EQ52 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vmn1r48Q9EQ52 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Vmn1r48Q9EQ52 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vmn1r48Q9EQ52 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vmn1r48Q9EQ52 Gm11687-201ENSMUST00000118911 886 ntBASIC17.32■□□□□ 0.36
Vmn1r48Q9EQ52 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vmn1r48Q9EQ52 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Vmn1r48Q9EQ52 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Vmn1r48Q9EQ52 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vmn1r48Q9EQ52 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Vmn1r48Q9EQ52 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vmn1r48Q9EQ52 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Vmn1r48Q9EQ52 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Vmn1r48Q9EQ52 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Vmn1r48Q9EQ52 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vmn1r48Q9EQ52 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Vmn1r48Q9EQ52 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vmn1r48Q9EQ52 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.3■□□□□ 0.36
Vmn1r48Q9EQ52 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vmn1r48Q9EQ52 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.3■□□□□ 0.36
Vmn1r48Q9EQ52 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.3■□□□□ 0.36
Vmn1r48Q9EQ52 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vmn1r48Q9EQ52 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vmn1r48Q9EQ52 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Vmn1r48Q9EQ52 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Vmn1r48Q9EQ52 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vmn1r48Q9EQ52 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vmn1r48Q9EQ52 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vmn1r48Q9EQ52 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Vmn1r48Q9EQ52 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vmn1r48Q9EQ52 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vmn1r48Q9EQ52 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vmn1r48Q9EQ52 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vmn1r48Q9EQ52 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Vmn1r48Q9EQ52 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vmn1r48Q9EQ52 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Vmn1r48Q9EQ52 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vmn1r48Q9EQ52 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Vmn1r48Q9EQ52 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.28■□□□□ 0.36
Vmn1r48Q9EQ52 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vmn1r48Q9EQ52 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vmn1r48Q9EQ52 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vmn1r48Q9EQ52 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vmn1r48Q9EQ52 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.28■□□□□ 0.36
Vmn1r48Q9EQ52 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vmn1r48Q9EQ52 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Vmn1r48Q9EQ52 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vmn1r48Q9EQ52 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Vmn1r48Q9EQ52 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vmn1r48Q9EQ52 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vmn1r48Q9EQ52 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vmn1r48Q9EQ52 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vmn1r48Q9EQ52 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vmn1r48Q9EQ52 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vmn1r48Q9EQ52 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vmn1r48Q9EQ52 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Vmn1r48Q9EQ52 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vmn1r48Q9EQ52 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vmn1r48Q9EQ52 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Vmn1r48Q9EQ52 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vmn1r48Q9EQ52 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Vmn1r48Q9EQ52 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Vmn1r48Q9EQ52 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Vmn1r48Q9EQ52 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vmn1r48Q9EQ52 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Vmn1r48Q9EQ52 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Vmn1r48Q9EQ52 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vmn1r48Q9EQ52 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Vmn1r48Q9EQ52 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vmn1r48Q9EQ52 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vmn1r48Q9EQ52 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vmn1r48Q9EQ52 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vmn1r48Q9EQ52 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.25■□□□□ 0.35
Vmn1r48Q9EQ52 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vmn1r48Q9EQ52 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vmn1r48Q9EQ52 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Vmn1r48Q9EQ52 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Vmn1r48Q9EQ52 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms