Protein–RNA interactions for Protein: Q9DC28

Csnk1d, Casein kinase I isoform delta, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1dQ9DC28 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Csnk1dQ9DC28 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Csnk1dQ9DC28 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Csnk1dQ9DC28 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Csnk1dQ9DC28 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Csnk1dQ9DC28 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Csnk1dQ9DC28 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Csnk1dQ9DC28 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Csnk1dQ9DC28 Mir7075-201ENSMUST00000184187 82 ntBASIC20.05■□□□□ 0.8
Csnk1dQ9DC28 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Csnk1dQ9DC28 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Csnk1dQ9DC28 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Csnk1dQ9DC28 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Csnk1dQ9DC28 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Csnk1dQ9DC28 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Csnk1dQ9DC28 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Csnk1dQ9DC28 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Csnk1dQ9DC28 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.04■□□□□ 0.8
Csnk1dQ9DC28 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Csnk1dQ9DC28 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Csnk1dQ9DC28 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.04■□□□□ 0.8
Csnk1dQ9DC28 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Csnk1dQ9DC28 Gm6139-201ENSMUST00000079261 882 ntBASIC20.04■□□□□ 0.8
Csnk1dQ9DC28 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Csnk1dQ9DC28 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Csnk1dQ9DC28 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Csnk1dQ9DC28 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Csnk1dQ9DC28 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Csnk1dQ9DC28 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Csnk1dQ9DC28 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.03■□□□□ 0.8
Csnk1dQ9DC28 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.03■□□□□ 0.8
Csnk1dQ9DC28 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Csnk1dQ9DC28 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.03■□□□□ 0.8
Csnk1dQ9DC28 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Csnk1dQ9DC28 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Csnk1dQ9DC28 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.03■□□□□ 0.8
Csnk1dQ9DC28 Spcs1-204ENSMUST00000226782 949 ntBASIC20.03■□□□□ 0.8
Csnk1dQ9DC28 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.03■□□□□ 0.8
Csnk1dQ9DC28 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Csnk1dQ9DC28 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Csnk1dQ9DC28 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Csnk1dQ9DC28 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.02■□□□□ 0.8
Csnk1dQ9DC28 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Csnk1dQ9DC28 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Csnk1dQ9DC28 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.02■□□□□ 0.8
Csnk1dQ9DC28 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.02■□□□□ 0.8
Csnk1dQ9DC28 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Csnk1dQ9DC28 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Csnk1dQ9DC28 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Csnk1dQ9DC28 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Csnk1dQ9DC28 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Csnk1dQ9DC28 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Csnk1dQ9DC28 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Csnk1dQ9DC28 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Csnk1dQ9DC28 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20■□□□□ 0.79
Csnk1dQ9DC28 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Csnk1dQ9DC28 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Csnk1dQ9DC28 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Csnk1dQ9DC28 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20■□□□□ 0.79
Csnk1dQ9DC28 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Csnk1dQ9DC28 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Csnk1dQ9DC28 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20■□□□□ 0.79
Csnk1dQ9DC28 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Csnk1dQ9DC28 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Csnk1dQ9DC28 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Csnk1dQ9DC28 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
Csnk1dQ9DC28 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Csnk1dQ9DC28 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Csnk1dQ9DC28 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Csnk1dQ9DC28 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Csnk1dQ9DC28 Gm12251-201ENSMUST00000117893 792 ntBASIC19.99■□□□□ 0.79
Csnk1dQ9DC28 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Csnk1dQ9DC28 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Csnk1dQ9DC28 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.99■□□□□ 0.79
Csnk1dQ9DC28 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Csnk1dQ9DC28 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Csnk1dQ9DC28 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.99■□□□□ 0.79
Csnk1dQ9DC28 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Csnk1dQ9DC28 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.99■□□□□ 0.79
Csnk1dQ9DC28 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Csnk1dQ9DC28 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Csnk1dQ9DC28 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
Csnk1dQ9DC28 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Csnk1dQ9DC28 Gm8493-201ENSMUST00000196881 489 ntBASIC19.98■□□□□ 0.79
Csnk1dQ9DC28 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Csnk1dQ9DC28 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Csnk1dQ9DC28 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Csnk1dQ9DC28 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Csnk1dQ9DC28 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Csnk1dQ9DC28 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Csnk1dQ9DC28 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Csnk1dQ9DC28 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Csnk1dQ9DC28 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Csnk1dQ9DC28 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Csnk1dQ9DC28 Gm43173-201ENSMUST00000202246 593 ntBASIC19.96■□□□□ 0.79
Csnk1dQ9DC28 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.96■□□□□ 0.79
Csnk1dQ9DC28 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Csnk1dQ9DC28 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Csnk1dQ9DC28 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Csnk1dQ9DC28 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms