Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nkd1Q99MH6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkd1Q99MH6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Nkd1Q99MH6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkd1Q99MH6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkd1Q99MH6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Nkd1Q99MH6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.92■□□□□ 0.62
Nkd1Q99MH6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkd1Q99MH6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkd1Q99MH6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkd1Q99MH6 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkd1Q99MH6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Nkd1Q99MH6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkd1Q99MH6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkd1Q99MH6 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkd1Q99MH6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Nkd1Q99MH6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.92■□□□□ 0.62
Nkd1Q99MH6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nkd1Q99MH6 Gm13238-201ENSMUST00000117655 780 ntBASIC18.92■□□□□ 0.62
Nkd1Q99MH6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkd1Q99MH6 Gm43566-201ENSMUST00000196851 808 ntBASIC18.92■□□□□ 0.62
Nkd1Q99MH6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkd1Q99MH6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkd1Q99MH6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkd1Q99MH6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkd1Q99MH6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkd1Q99MH6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkd1Q99MH6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkd1Q99MH6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkd1Q99MH6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkd1Q99MH6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.91■□□□□ 0.62
Nkd1Q99MH6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkd1Q99MH6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkd1Q99MH6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkd1Q99MH6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkd1Q99MH6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.91■□□□□ 0.62
Nkd1Q99MH6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nkd1Q99MH6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nkd1Q99MH6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.91■□□□□ 0.62
Nkd1Q99MH6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Nkd1Q99MH6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkd1Q99MH6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nkd1Q99MH6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkd1Q99MH6 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.91■□□□□ 0.62
Nkd1Q99MH6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkd1Q99MH6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkd1Q99MH6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkd1Q99MH6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.9■□□□□ 0.62
Nkd1Q99MH6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkd1Q99MH6 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Nkd1Q99MH6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkd1Q99MH6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Nkd1Q99MH6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkd1Q99MH6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.9■□□□□ 0.62
Nkd1Q99MH6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkd1Q99MH6 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkd1Q99MH6 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkd1Q99MH6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkd1Q99MH6 Gm10399-202ENSMUST00000202768 748 ntBASIC18.89■□□□□ 0.61
Nkd1Q99MH6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.89■□□□□ 0.61
Nkd1Q99MH6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
Nkd1Q99MH6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.88■□□□□ 0.61
Nkd1Q99MH6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkd1Q99MH6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkd1Q99MH6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkd1Q99MH6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Nkd1Q99MH6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Nkd1Q99MH6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.88■□□□□ 0.61
Nkd1Q99MH6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Nkd1Q99MH6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Nkd1Q99MH6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.88■□□□□ 0.61
Nkd1Q99MH6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.88■□□□□ 0.61
Nkd1Q99MH6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkd1Q99MH6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkd1Q99MH6 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.87■□□□□ 0.61
Nkd1Q99MH6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.87■□□□□ 0.61
Nkd1Q99MH6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkd1Q99MH6 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkd1Q99MH6 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkd1Q99MH6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkd1Q99MH6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkd1Q99MH6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkd1Q99MH6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkd1Q99MH6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Nkd1Q99MH6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkd1Q99MH6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkd1Q99MH6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkd1Q99MH6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Nkd1Q99MH6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkd1Q99MH6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkd1Q99MH6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkd1Q99MH6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.86■□□□□ 0.61
Nkd1Q99MH6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkd1Q99MH6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Nkd1Q99MH6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.86■□□□□ 0.61
Nkd1Q99MH6 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.86■□□□□ 0.61
Nkd1Q99MH6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkd1Q99MH6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkd1Q99MH6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkd1Q99MH6 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms