Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga4Q91XY4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga4Q91XY4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga4Q91XY4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.68■□□□□ 0.74
Pcdhga4Q91XY4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhga4Q91XY4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga4Q91XY4 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga4Q91XY4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga4Q91XY4 Gm12821-201ENSMUST00000120022 600 ntBASIC19.67■□□□□ 0.74
Pcdhga4Q91XY4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga4Q91XY4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pcdhga4Q91XY4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdhga4Q91XY4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga4Q91XY4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhga4Q91XY4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga4Q91XY4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhga4Q91XY4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga4Q91XY4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhga4Q91XY4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdhga4Q91XY4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga4Q91XY4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga4Q91XY4 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.66■□□□□ 0.74
Pcdhga4Q91XY4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga4Q91XY4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga4Q91XY4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga4Q91XY4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga4Q91XY4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhga4Q91XY4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga4Q91XY4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhga4Q91XY4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga4Q91XY4 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga4Q91XY4 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.65■□□□□ 0.74
Pcdhga4Q91XY4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga4Q91XY4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Pcdhga4Q91XY4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhga4Q91XY4 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.65■□□□□ 0.74
Pcdhga4Q91XY4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.65■□□□□ 0.74
Pcdhga4Q91XY4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhga4Q91XY4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Pcdhga4Q91XY4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Pcdhga4Q91XY4 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.64■□□□□ 0.73
Pcdhga4Q91XY4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.64■□□□□ 0.73
Pcdhga4Q91XY4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
Pcdhga4Q91XY4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhga4Q91XY4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhga4Q91XY4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhga4Q91XY4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhga4Q91XY4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhga4Q91XY4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhga4Q91XY4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Pcdhga4Q91XY4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhga4Q91XY4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Pcdhga4Q91XY4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhga4Q91XY4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhga4Q91XY4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhga4Q91XY4 Gm15039-201ENSMUST00000118914 875 ntBASIC19.62■□□□□ 0.73
Pcdhga4Q91XY4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhga4Q91XY4 Gm21956-201ENSMUST00000179946 522 ntBASIC19.62■□□□□ 0.73
Pcdhga4Q91XY4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhga4Q91XY4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhga4Q91XY4 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.62■□□□□ 0.73
Pcdhga4Q91XY4 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.62■□□□□ 0.73
Pcdhga4Q91XY4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhga4Q91XY4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhga4Q91XY4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhga4Q91XY4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Pcdhga4Q91XY4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.62■□□□□ 0.73
Pcdhga4Q91XY4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhga4Q91XY4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhga4Q91XY4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhga4Q91XY4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhga4Q91XY4 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.61■□□□□ 0.73
Pcdhga4Q91XY4 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.61■□□□□ 0.73
Pcdhga4Q91XY4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhga4Q91XY4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhga4Q91XY4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhga4Q91XY4 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.6■□□□□ 0.73
Pcdhga4Q91XY4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhga4Q91XY4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdhga4Q91XY4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhga4Q91XY4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Pcdhga4Q91XY4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhga4Q91XY4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Pcdhga4Q91XY4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhga4Q91XY4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhga4Q91XY4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhga4Q91XY4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhga4Q91XY4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhga4Q91XY4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhga4Q91XY4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Pcdhga4Q91XY4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhga4Q91XY4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhga4Q91XY4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhga4Q91XY4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.59■□□□□ 0.73
Pcdhga4Q91XY4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Pcdhga4Q91XY4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhga4Q91XY4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhga4Q91XY4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhga4Q91XY4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhga4Q91XY4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms