Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
NPAS4Q8IUM7 AC133637.1-201ENST00000624115 1537 ntBASIC24.35■■□□□ 1.49
NPAS4Q8IUM7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
NPAS4Q8IUM7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NPAS4Q8IUM7 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
NPAS4Q8IUM7 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
NPAS4Q8IUM7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NPAS4Q8IUM7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
NPAS4Q8IUM7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.35■■□□□ 1.49
NPAS4Q8IUM7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
NPAS4Q8IUM7 KRT18P5-201ENST00000436075 1291 ntBASIC24.35■■□□□ 1.49
NPAS4Q8IUM7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
NPAS4Q8IUM7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NPAS4Q8IUM7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.35■■□□□ 1.49
NPAS4Q8IUM7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
NPAS4Q8IUM7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.35■■□□□ 1.49
NPAS4Q8IUM7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
NPAS4Q8IUM7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
NPAS4Q8IUM7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
NPAS4Q8IUM7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
NPAS4Q8IUM7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.35■■□□□ 1.49
NPAS4Q8IUM7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
NPAS4Q8IUM7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
NPAS4Q8IUM7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.34■■□□□ 1.49
NPAS4Q8IUM7 MIR572-201ENST00000384983 95 ntBASIC24.34■■□□□ 1.49
NPAS4Q8IUM7 AC123595.1-201ENST00000440769 1046 ntBASIC24.34■■□□□ 1.49
NPAS4Q8IUM7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.34■■□□□ 1.49
NPAS4Q8IUM7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
NPAS4Q8IUM7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.34■■□□□ 1.49
NPAS4Q8IUM7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NPAS4Q8IUM7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
NPAS4Q8IUM7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
NPAS4Q8IUM7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.33■■□□□ 1.49
NPAS4Q8IUM7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
NPAS4Q8IUM7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
NPAS4Q8IUM7 AC022517.1-201ENST00000592429 346 ntBASIC24.33■■□□□ 1.49
NPAS4Q8IUM7 AL499627.2-201ENST00000606283 725 ntBASIC24.33■■□□□ 1.49
NPAS4Q8IUM7 AP003733.4-201ENST00000623785 1697 ntBASIC24.33■■□□□ 1.49
NPAS4Q8IUM7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
NPAS4Q8IUM7 AC022211.4-201ENST00000625094 2161 ntBASIC24.32■■□□□ 1.48
NPAS4Q8IUM7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.32■■□□□ 1.48
NPAS4Q8IUM7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
NPAS4Q8IUM7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
NPAS4Q8IUM7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.32■■□□□ 1.48
NPAS4Q8IUM7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.32■■□□□ 1.48
NPAS4Q8IUM7 DUX4L2-201ENST00000561772 1275 ntBASIC24.32■■□□□ 1.48
NPAS4Q8IUM7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.32■■□□□ 1.48
NPAS4Q8IUM7 DUX4L6-201ENST00000626483 1275 ntBASIC24.32■■□□□ 1.48
NPAS4Q8IUM7 DUX4L1-201ENST00000627662 1275 ntBASIC24.32■■□□□ 1.48
NPAS4Q8IUM7 DUX4L8-201ENST00000629013 1275 ntBASIC24.32■■□□□ 1.48
NPAS4Q8IUM7 DUX4L3-201ENST00000630187 1275 ntBASIC24.32■■□□□ 1.48
NPAS4Q8IUM7 DUX4L7-201ENST00000630678 1275 ntBASIC24.32■■□□□ 1.48
NPAS4Q8IUM7 DUX4L5-201ENST00000630834 1275 ntBASIC24.32■■□□□ 1.48
NPAS4Q8IUM7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.32■■□□□ 1.48
NPAS4Q8IUM7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.31■■□□□ 1.48
NPAS4Q8IUM7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
NPAS4Q8IUM7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
NPAS4Q8IUM7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.31■■□□□ 1.48
NPAS4Q8IUM7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
NPAS4Q8IUM7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.31■■□□□ 1.48
NPAS4Q8IUM7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.31■■□□□ 1.48
NPAS4Q8IUM7 AC012414.1-201ENST00000556676 535 ntBASIC24.31■■□□□ 1.48
NPAS4Q8IUM7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
NPAS4Q8IUM7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.31■■□□□ 1.48
NPAS4Q8IUM7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.31■■□□□ 1.48
NPAS4Q8IUM7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
NPAS4Q8IUM7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
NPAS4Q8IUM7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NPAS4Q8IUM7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
NPAS4Q8IUM7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
NPAS4Q8IUM7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
NPAS4Q8IUM7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.3■■□□□ 1.48
NPAS4Q8IUM7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.3■■□□□ 1.48
NPAS4Q8IUM7 AL354811.1-201ENST00000610286 706 ntBASIC24.3■■□□□ 1.48
NPAS4Q8IUM7 IKBKGP1-201ENST00000612193 1073 ntBASIC24.3■■□□□ 1.48
NPAS4Q8IUM7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.3■■□□□ 1.48
NPAS4Q8IUM7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
NPAS4Q8IUM7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
NPAS4Q8IUM7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
NPAS4Q8IUM7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.29■■□□□ 1.48
NPAS4Q8IUM7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NPAS4Q8IUM7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
NPAS4Q8IUM7 MIR6084-201ENST00000622012 110 ntBASIC24.29■■□□□ 1.48
NPAS4Q8IUM7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.29■■□□□ 1.48
NPAS4Q8IUM7 RARRES2P11-201ENST00000635158 484 ntBASIC24.29■■□□□ 1.48
NPAS4Q8IUM7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.29■■□□□ 1.48
NPAS4Q8IUM7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
NPAS4Q8IUM7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NPAS4Q8IUM7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
NPAS4Q8IUM7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NPAS4Q8IUM7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
NPAS4Q8IUM7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
NPAS4Q8IUM7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
NPAS4Q8IUM7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
NPAS4Q8IUM7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NPAS4Q8IUM7 OR2I1P-207ENST00000453522 948 ntBASIC24.28■■□□□ 1.48
NPAS4Q8IUM7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
NPAS4Q8IUM7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.28■■□□□ 1.48
NPAS4Q8IUM7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.28■■□□□ 1.48
NPAS4Q8IUM7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms