Protein–RNA interactions for Protein: Q8BLF2

Cdkl3, Cyclin-dependent kinase-like 3, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl3Q8BLF2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdkl3Q8BLF2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cdkl3Q8BLF2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cdkl3Q8BLF2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cdkl3Q8BLF2 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.29■□□□□ 0.36
Cdkl3Q8BLF2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdkl3Q8BLF2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdkl3Q8BLF2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cdkl3Q8BLF2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdkl3Q8BLF2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdkl3Q8BLF2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdkl3Q8BLF2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cdkl3Q8BLF2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cdkl3Q8BLF2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl3Q8BLF2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl3Q8BLF2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl3Q8BLF2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
Cdkl3Q8BLF2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.28■□□□□ 0.36
Cdkl3Q8BLF2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl3Q8BLF2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl3Q8BLF2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl3Q8BLF2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl3Q8BLF2 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl3Q8BLF2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl3Q8BLF2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl3Q8BLF2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cdkl3Q8BLF2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.28■□□□□ 0.36
Cdkl3Q8BLF2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl3Q8BLF2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cdkl3Q8BLF2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cdkl3Q8BLF2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cdkl3Q8BLF2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.27■□□□□ 0.36
Cdkl3Q8BLF2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.27■□□□□ 0.36
Cdkl3Q8BLF2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Cdkl3Q8BLF2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cdkl3Q8BLF2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cdkl3Q8BLF2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.27■□□□□ 0.35
Cdkl3Q8BLF2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdkl3Q8BLF2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdkl3Q8BLF2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdkl3Q8BLF2 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cdkl3Q8BLF2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl3Q8BLF2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Cdkl3Q8BLF2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cdkl3Q8BLF2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl3Q8BLF2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl3Q8BLF2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl3Q8BLF2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl3Q8BLF2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.26■□□□□ 0.35
Cdkl3Q8BLF2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl3Q8BLF2 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cdkl3Q8BLF2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cdkl3Q8BLF2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl3Q8BLF2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl3Q8BLF2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl3Q8BLF2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl3Q8BLF2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl3Q8BLF2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl3Q8BLF2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.25■□□□□ 0.35
Cdkl3Q8BLF2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cdkl3Q8BLF2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkl3Q8BLF2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkl3Q8BLF2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkl3Q8BLF2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.24■□□□□ 0.35
Cdkl3Q8BLF2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkl3Q8BLF2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkl3Q8BLF2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkl3Q8BLF2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkl3Q8BLF2 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkl3Q8BLF2 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkl3Q8BLF2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cdkl3Q8BLF2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkl3Q8BLF2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkl3Q8BLF2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkl3Q8BLF2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.23■□□□□ 0.35
Cdkl3Q8BLF2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkl3Q8BLF2 Gm45364-201ENSMUST00000210883 159 ntBASIC17.23■□□□□ 0.35
Cdkl3Q8BLF2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkl3Q8BLF2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkl3Q8BLF2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkl3Q8BLF2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkl3Q8BLF2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl3Q8BLF2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl3Q8BLF2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl3Q8BLF2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl3Q8BLF2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.22■□□□□ 0.35
Cdkl3Q8BLF2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
Cdkl3Q8BLF2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.22■□□□□ 0.35
Cdkl3Q8BLF2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl3Q8BLF2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl3Q8BLF2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl3Q8BLF2 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Cdkl3Q8BLF2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl3Q8BLF2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cdkl3Q8BLF2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.21■□□□□ 0.35
Cdkl3Q8BLF2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Cdkl3Q8BLF2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl3Q8BLF2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl3Q8BLF2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cdkl3Q8BLF2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms