Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cks1bP61025 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cks1bP61025 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cks1bP61025 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cks1bP61025 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cks1bP61025 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1bP61025 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1bP61025 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1bP61025 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1bP61025 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1bP61025 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1bP61025 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1bP61025 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1bP61025 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cks1bP61025 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1bP61025 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.2□□□□□ -0.14
Cks1bP61025 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1bP61025 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cks1bP61025 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1bP61025 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1bP61025 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1bP61025 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Cks1bP61025 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cks1bP61025 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cks1bP61025 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cks1bP61025 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Cks1bP61025 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cks1bP61025 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cks1bP61025 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cks1bP61025 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cks1bP61025 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cks1bP61025 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cks1bP61025 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cks1bP61025 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cks1bP61025 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cks1bP61025 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cks1bP61025 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cks1bP61025 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Cks1bP61025 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cks1bP61025 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cks1bP61025 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cks1bP61025 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cks1bP61025 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cks1bP61025 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Cks1bP61025 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cks1bP61025 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cks1bP61025 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Cks1bP61025 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cks1bP61025 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.18□□□□□ -0.14
Cks1bP61025 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cks1bP61025 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cks1bP61025 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cks1bP61025 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cks1bP61025 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Cks1bP61025 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC14.18□□□□□ -0.14
Cks1bP61025 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cks1bP61025 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Cks1bP61025 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.18□□□□□ -0.14
Cks1bP61025 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1bP61025 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1bP61025 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1bP61025 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1bP61025 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1bP61025 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cks1bP61025 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC14.17□□□□□ -0.14
Cks1bP61025 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC14.17□□□□□ -0.14
Cks1bP61025 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1bP61025 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC14.17□□□□□ -0.14
Cks1bP61025 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC14.17□□□□□ -0.14
Cks1bP61025 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1bP61025 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1bP61025 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.17□□□□□ -0.14
Cks1bP61025 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1bP61025 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1bP61025 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1bP61025 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cks1bP61025 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Cks1bP61025 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cks1bP61025 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cks1bP61025 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Cks1bP61025 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cks1bP61025 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cks1bP61025 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cks1bP61025 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cks1bP61025 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cks1bP61025 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.16□□□□□ -0.14
Cks1bP61025 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cks1bP61025 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cks1bP61025 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1bP61025 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cks1bP61025 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Cks1bP61025 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1bP61025 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1bP61025 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1bP61025 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1bP61025 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1bP61025 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1bP61025 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cks1bP61025 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC14.15□□□□□ -0.14
Cks1bP61025 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms