Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 ALR2YFL050C 2577 nt5.42□□□□□ -1.54
SUB1P54000 SSB1YDL229W 1842 nt5.42□□□□□ -1.54
SUB1P54000 SSB2YNL209W 1842 nt5.42□□□□□ -1.54
SUB1P54000 YIL086CYIL086C 309 nt5.42□□□□□ -1.54
SUB1P54000 TTI2YJR136C 1266 nt5.42□□□□□ -1.54
SUB1P54000 YKL071WYKL071W 771 nt5.42□□□□□ -1.54
SUB1P54000 WRS1YOL097C 1299 nt5.42□□□□□ -1.54
SUB1P54000 SCO1YBR037C 888 nt5.42□□□□□ -1.54
SUB1P54000 SUI3YPL237W 858 nt5.42□□□□□ -1.54
SUB1P54000 MSN4YKL062W 1893 nt5.42□□□□□ -1.54
SUB1P54000 MRK1YDL079C 1506 nt5.42□□□□□ -1.54
SUB1P54000 MCH4YOL119C 1506 nt5.42□□□□□ -1.54
SUB1P54000 CUS1YMR240C 1311 nt5.42□□□□□ -1.54
SUB1P54000 DNF2YDR093W 4839 nt5.41□□□□□ -1.54
SUB1P54000 TGL1YKL140W 1647 nt5.41□□□□□ -1.54
SUB1P54000 SAS4YDR181C 1446 nt5.41□□□□□ -1.54
SUB1P54000 MAF1YDR005C 1188 nt5.41□□□□□ -1.54
SUB1P54000 TAF10YDR167W 621 nt5.41□□□□□ -1.54
SUB1P54000 YGL132WYGL132W 336 nt5.41□□□□□ -1.54
SUB1P54000 ARD1YHR013C 717 nt5.41□□□□□ -1.54
SUB1P54000 SWC7YLR385C 399 nt5.41□□□□□ -1.54
SUB1P54000 RPA49YNL248C 1248 nt5.41□□□□□ -1.54
SUB1P54000 YGK3YOL128C 1128 nt5.41□□□□□ -1.54
SUB1P54000 YAP1YML007W 1953 nt5.41□□□□□ -1.54
SUB1P54000 YLR345WYLR345W 1530 nt5.41□□□□□ -1.54
SUB1P54000 NMD3YHR170W 1557 nt5.41□□□□□ -1.54
SUB1P54000 SPO1YNL012W 1896 nt5.41□□□□□ -1.54
SUB1P54000 RAD54YGL163C 2697 nt5.41□□□□□ -1.54
SUB1P54000 YFL034WYFL034W 3222 nt5.4□□□□□ -1.54
SUB1P54000 YCR101CYCR101C 549 nt5.4□□□□□ -1.54
SUB1P54000 MHF2YDL160C-A 243 nt5.4□□□□□ -1.54
SUB1P54000 COS12YGL263W 1143 nt5.4□□□□□ -1.54
SUB1P54000 MTC2YKL098W 1074 nt5.4□□□□□ -1.54
SUB1P54000 RPS19BYNL302C 435 nt5.4□□□□□ -1.54
SUB1P54000 VPS21YOR089C 633 nt5.4□□□□□ -1.54
SUB1P54000 ISU2YOR226C 471 nt5.4□□□□□ -1.54
SUB1P54000 YPL191CYPL191C 1083 nt5.4□□□□□ -1.54
SUB1P54000 TIF4632YGL049C 2745 nt5.4□□□□□ -1.55
SUB1P54000 RDH54YBR073W 2877 nt5.4□□□□□ -1.55
SUB1P54000 ADE4YMR300C 1533 nt5.39□□□□□ -1.55
SUB1P54000 BUD30YDL151C 582 nt5.39□□□□□ -1.55
SUB1P54000 SPI1YER150W 447 nt5.39□□□□□ -1.55
SUB1P54000 SFH5YJL145W 885 nt5.39□□□□□ -1.55
SUB1P54000 SPC3YLR066W 555 nt5.39□□□□□ -1.55
SUB1P54000 CPR3YML078W 549 nt5.39□□□□□ -1.55
SUB1P54000 YNL097W-AYNL097W-A 156 nt5.39□□□□□ -1.55
SUB1P54000 CDC21YOR074C 915 nt5.39□□□□□ -1.55
SUB1P54000 YCL022CYCL022C 516 nt5.39□□□□□ -1.55
SUB1P54000 RIM15YFL033C 5313 nt5.39□□□□□ -1.55
SUB1P54000 MDR1YGR100W 2853 nt5.38□□□□□ -1.55
SUB1P54000 SMP3YOR149C 1551 nt5.38□□□□□ -1.55
SUB1P54000 GEP3YOR205C 1671 nt5.38□□□□□ -1.55
SUB1P54000 YCR047W-AYCR047W-A 207 nt5.38□□□□□ -1.55
SUB1P54000 SLC1YDL052C 912 nt5.38□□□□□ -1.55
SUB1P54000 FOL3YMR113W 1284 nt5.38□□□□□ -1.55
SUB1P54000 GPM3YOL056W 912 nt5.38□□□□□ -1.55
SUB1P54000 REG2YBR050C 1017 nt5.38□□□□□ -1.55
SUB1P54000 STE7YDL159W 1548 nt5.38□□□□□ -1.55
SUB1P54000 PUS1YPL212C 1635 nt5.37□□□□□ -1.55
SUB1P54000 YHR045WYHR045W 1683 nt5.37□□□□□ -1.55
SUB1P54000 NAM2YLR382C 2685 nt5.37□□□□□ -1.55
SUB1P54000 GDB1YPR184W 4611 nt5.37□□□□□ -1.55
SUB1P54000 VAC17YCL063W 1272 nt5.37□□□□□ -1.55
SUB1P54000 snR57snR57 88 nt5.37□□□□□ -1.55
SUB1P54000 AAD4YDL243C 990 nt5.37□□□□□ -1.55
SUB1P54000 PMP3YDR276C 168 nt5.37□□□□□ -1.55
SUB1P54000 ISR1YPR106W 1332 nt5.37□□□□□ -1.55
SUB1P54000 TDA6YPR157W 1404 nt5.37□□□□□ -1.55
SUB1P54000 PAL1YDR348C 1500 nt5.37□□□□□ -1.55
SUB1P54000 HCM1YCR065W 1695 nt5.37□□□□□ -1.55
SUB1P54000 SPO73YER046W 432 nt5.36□□□□□ -1.55
SUB1P54000 RPL34AYER056C-A 366 nt5.36□□□□□ -1.55
SUB1P54000 SUA5YGL169W 1281 nt5.36□□□□□ -1.55
SUB1P54000 RAI1YGL246C 1164 nt5.36□□□□□ -1.55
SUB1P54000 tN(GUU)CtN(GUU)C 74 nt5.36□□□□□ -1.55
SUB1P54000 tN(GUU)FtN(GUU)F 74 nt5.36□□□□□ -1.55
SUB1P54000 tN(GUU)GtN(GUU)G 74 nt5.36□□□□□ -1.55
SUB1P54000 tN(GUU)KtN(GUU)K 74 nt5.36□□□□□ -1.55
SUB1P54000 tN(GUU)LtN(GUU)L 74 nt5.36□□□□□ -1.55
SUB1P54000 tN(GUU)N1tN(GUU)N1 74 nt5.36□□□□□ -1.55
SUB1P54000 tN(GUU)N2tN(GUU)N2 74 nt5.36□□□□□ -1.55
SUB1P54000 tN(GUU)O1tN(GUU)O1 74 nt5.36□□□□□ -1.55
SUB1P54000 tN(GUU)O2tN(GUU)O2 74 nt5.36□□□□□ -1.55
SUB1P54000 tN(GUU)PtN(GUU)P 74 nt5.36□□□□□ -1.55
SUB1P54000 YPT53YNL093W 663 nt5.36□□□□□ -1.55
SUB1P54000 ROX3YBL093C 663 nt5.36□□□□□ -1.55
SUB1P54000 YPL071CYPL071C 471 nt5.36□□□□□ -1.55
SUB1P54000 GZF3YJL110C 1656 nt5.36□□□□□ -1.55
SUB1P54000 RNA14YMR061W 2034 nt5.36□□□□□ -1.55
SUB1P54000 FAA1YOR317W 2103 nt5.36□□□□□ -1.55
SUB1P54000 CDC4YFL009W 2340 nt5.36□□□□□ -1.55
SUB1P54000 LYS2YBR115C 4179 nt5.35□□□□□ -1.55
SUB1P54000 ULA1YPL003W 1389 nt5.35□□□□□ -1.55
SUB1P54000 YDR282CYDR282C 1245 nt5.35□□□□□ -1.55
SUB1P54000 PRE9YGR135W 777 nt5.35□□□□□ -1.55
SUB1P54000 MOG1YJR074W 657 nt5.35□□□□□ -1.55
SUB1P54000 YLR225CYLR225C 1224 nt5.35□□□□□ -1.55
SUB1P54000 MMP1YLL061W 1752 nt5.34□□□□□ -1.55
SUB1P54000 MGS1YNL218W 1764 nt5.34□□□□□ -1.55
SUB1P54000 SPS2YDR522C 1509 nt5.34□□□□□ -1.55
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms