Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.35■□□□□ 0.53
P01852 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
P01852 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01852 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01852 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.35■□□□□ 0.53
P01852 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.35■□□□□ 0.53
P01852 Gm43530-201ENSMUST00000195920 274 ntBASIC18.35■□□□□ 0.53
P01852 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01852 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01852 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01852 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01852 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
P01852 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
P01852 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
P01852 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
P01852 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
P01852 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
P01852 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
P01852 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.33■□□□□ 0.52
P01852 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.33■□□□□ 0.52
P01852 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
P01852 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
P01852 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
P01852 Iqck-206ENSMUST00000208658 2891 ntBASIC18.32■□□□□ 0.52
P01852 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P01852 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
P01852 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
P01852 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
P01852 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P01852 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
P01852 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
P01852 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
P01852 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P01852 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01852 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01852 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P01852 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.31■□□□□ 0.52
P01852 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.31■□□□□ 0.52
P01852 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P01852 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P01852 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P01852 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P01852 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01852 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
P01852 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
P01852 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01852 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01852 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
P01852 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01852 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01852 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P01852 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P01852 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01852 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01852 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P01852 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.3■□□□□ 0.52
P01852 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01852 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01852 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01852 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
P01852 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
P01852 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P01852 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P01852 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P01852 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P01852 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.29■□□□□ 0.52
P01852 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
P01852 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01852 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
P01852 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01852 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01852 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01852 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.28■□□□□ 0.52
P01852 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01852 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01852 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01852 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01852 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
P01852 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01852 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
P01852 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
P01852 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P01852 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.27■□□□□ 0.52
P01852 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.27■□□□□ 0.52
P01852 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P01852 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.27■□□□□ 0.52
P01852 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
P01852 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P01852 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P01852 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.27■□□□□ 0.51
P01852 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
P01852 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P01852 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.26■□□□□ 0.51
P01852 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
P01852 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P01852 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
P01852 Gm12821-201ENSMUST00000120022 600 ntBASIC18.26■□□□□ 0.51
P01852 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
P01852 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
P01852 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms