Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RPP40O75818 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
RPP40O75818 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RPP40O75818 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.09■■□□□ 1.29
RPP40O75818 AC099791.2-201ENST00000605725 427 ntBASIC23.09■■□□□ 1.29
RPP40O75818 AC011298.3-201ENST00000615796 283 ntBASIC23.09■■□□□ 1.29
RPP40O75818 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.09■■□□□ 1.29
RPP40O75818 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.09■■□□□ 1.29
RPP40O75818 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.09■■□□□ 1.29
RPP40O75818 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RPP40O75818 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.08■■□□□ 1.29
RPP40O75818 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
RPP40O75818 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
RPP40O75818 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RPP40O75818 AL138724.1-201ENST00000606771 1088 ntBASIC23.08■■□□□ 1.29
RPP40O75818 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
RPP40O75818 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
RPP40O75818 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
RPP40O75818 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RPP40O75818 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.08■■□□□ 1.29
RPP40O75818 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
RPP40O75818 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
RPP40O75818 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
RPP40O75818 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RPP40O75818 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
RPP40O75818 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RPP40O75818 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
RPP40O75818 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RPP40O75818 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
RPP40O75818 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RPP40O75818 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPP40O75818 AC099791.1-201ENST00000416440 715 ntBASIC23.06■■□□□ 1.28
RPP40O75818 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.06■■□□□ 1.28
RPP40O75818 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.06■■□□□ 1.28
RPP40O75818 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.06■■□□□ 1.28
RPP40O75818 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.06■■□□□ 1.28
RPP40O75818 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.06■■□□□ 1.28
RPP40O75818 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.06■■□□□ 1.28
RPP40O75818 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RPP40O75818 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
RPP40O75818 AL161729.1-201ENST00000604104 1402 ntBASIC23.06■■□□□ 1.28
RPP40O75818 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.06■■□□□ 1.28
RPP40O75818 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPP40O75818 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RPP40O75818 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.06■■□□□ 1.28
RPP40O75818 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPP40O75818 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPP40O75818 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPP40O75818 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.05■■□□□ 1.28
RPP40O75818 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RPP40O75818 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.05■■□□□ 1.28
RPP40O75818 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.05■■□□□ 1.28
RPP40O75818 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
RPP40O75818 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPP40O75818 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RPP40O75818 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.04■■□□□ 1.28
RPP40O75818 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
RPP40O75818 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RPP40O75818 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPP40O75818 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.04■■□□□ 1.28
RPP40O75818 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
RPP40O75818 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPP40O75818 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.04■■□□□ 1.28
RPP40O75818 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.04■■□□□ 1.28
RPP40O75818 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPP40O75818 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RPP40O75818 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPP40O75818 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
RPP40O75818 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPP40O75818 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RPP40O75818 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.03■■□□□ 1.28
RPP40O75818 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPP40O75818 AL022069.1-201ENST00000568025 1636 ntBASIC23.03■■□□□ 1.28
RPP40O75818 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RPP40O75818 ABCB10P4-201ENST00000566803 2184 ntBASIC23.03■■□□□ 1.28
RPP40O75818 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RPP40O75818 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
RPP40O75818 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.02■■□□□ 1.28
RPP40O75818 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.02■■□□□ 1.28
RPP40O75818 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
RPP40O75818 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.02■■□□□ 1.28
RPP40O75818 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.02■■□□□ 1.28
RPP40O75818 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
RPP40O75818 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
RPP40O75818 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
RPP40O75818 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RPP40O75818 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
RPP40O75818 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RPP40O75818 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RPP40O75818 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RPP40O75818 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.01■■□□□ 1.27
RPP40O75818 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC23.01■■□□□ 1.27
RPP40O75818 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RPP40O75818 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RPP40O75818 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RPP40O75818 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.01■■□□□ 1.27
RPP40O75818 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RPP40O75818 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RPP40O75818 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RPP40O75818 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms