Protein–RNA interactions for Protein: O70157

Top3a, DNA topoisomerase 3-alpha, mousemouse

Predictions only

Length 1,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top3aO70157 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Top3aO70157 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top3aO70157 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Top3aO70157 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top3aO70157 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Top3aO70157 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top3aO70157 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top3aO70157 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Top3aO70157 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Top3aO70157 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top3aO70157 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top3aO70157 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.15■□□□□ 0.82
Top3aO70157 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Top3aO70157 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top3aO70157 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
Top3aO70157 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top3aO70157 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top3aO70157 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top3aO70157 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top3aO70157 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top3aO70157 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Top3aO70157 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Top3aO70157 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Top3aO70157 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Top3aO70157 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Top3aO70157 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Top3aO70157 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Top3aO70157 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.13■□□□□ 0.81
Top3aO70157 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Top3aO70157 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Top3aO70157 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Top3aO70157 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Top3aO70157 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Top3aO70157 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.12■□□□□ 0.81
Top3aO70157 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Top3aO70157 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Top3aO70157 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.12■□□□□ 0.81
Top3aO70157 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Top3aO70157 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.12■□□□□ 0.81
Top3aO70157 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Top3aO70157 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Top3aO70157 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Top3aO70157 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Top3aO70157 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Top3aO70157 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Top3aO70157 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Top3aO70157 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Top3aO70157 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Top3aO70157 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Top3aO70157 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Top3aO70157 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Top3aO70157 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Top3aO70157 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Top3aO70157 Rps24-207ENSMUST00000224568 714 ntBASIC20.1■□□□□ 0.81
Top3aO70157 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Top3aO70157 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Top3aO70157 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Top3aO70157 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Top3aO70157 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Top3aO70157 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Top3aO70157 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Top3aO70157 Gm14117-201ENSMUST00000122417 843 ntBASIC20.09■□□□□ 0.81
Top3aO70157 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.09■□□□□ 0.81
Top3aO70157 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Top3aO70157 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.09■□□□□ 0.81
Top3aO70157 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Top3aO70157 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Top3aO70157 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Top3aO70157 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Top3aO70157 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Top3aO70157 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Top3aO70157 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Top3aO70157 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.08■□□□□ 0.81
Top3aO70157 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.08■□□□□ 0.81
Top3aO70157 Gm7143-201ENSMUST00000222811 859 ntBASIC20.08■□□□□ 0.81
Top3aO70157 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Top3aO70157 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Top3aO70157 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Top3aO70157 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Top3aO70157 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Top3aO70157 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Top3aO70157 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Top3aO70157 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Top3aO70157 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Top3aO70157 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Top3aO70157 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Top3aO70157 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Top3aO70157 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Top3aO70157 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Top3aO70157 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Top3aO70157 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Top3aO70157 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Top3aO70157 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Top3aO70157 Gm45102-201ENSMUST00000207427 857 ntBASIC20.07■□□□□ 0.8
Top3aO70157 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Top3aO70157 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Top3aO70157 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Top3aO70157 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Top3aO70157 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Top3aO70157 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms