Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb9E9Q5G2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb9E9Q5G2 Gm15039-201ENSMUST00000118914 875 ntBASIC23.82■■□□□ 1.4
Pcdhb9E9Q5G2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Pcdhb9E9Q5G2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb9E9Q5G2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb9E9Q5G2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb9E9Q5G2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb9E9Q5G2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb9E9Q5G2 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Pcdhb9E9Q5G2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb9E9Q5G2 Gm12251-201ENSMUST00000117893 792 ntBASIC23.81■■□□□ 1.4
Pcdhb9E9Q5G2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.81■■□□□ 1.4
Pcdhb9E9Q5G2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb9E9Q5G2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
Pcdhb9E9Q5G2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb9E9Q5G2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb9E9Q5G2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb9E9Q5G2 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb9E9Q5G2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC23.8■■□□□ 1.4
Pcdhb9E9Q5G2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
Pcdhb9E9Q5G2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb9E9Q5G2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb9E9Q5G2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb9E9Q5G2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC23.8■■□□□ 1.4
Pcdhb9E9Q5G2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Pcdhb9E9Q5G2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb9E9Q5G2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb9E9Q5G2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb9E9Q5G2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb9E9Q5G2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.79■■□□□ 1.4
Pcdhb9E9Q5G2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb9E9Q5G2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb9E9Q5G2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Pcdhb9E9Q5G2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC23.79■■□□□ 1.4
Pcdhb9E9Q5G2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb9E9Q5G2 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.79■■□□□ 1.4
Pcdhb9E9Q5G2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb9E9Q5G2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb9E9Q5G2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhb9E9Q5G2 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhb9E9Q5G2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhb9E9Q5G2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhb9E9Q5G2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Pcdhb9E9Q5G2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhb9E9Q5G2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhb9E9Q5G2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhb9E9Q5G2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhb9E9Q5G2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhb9E9Q5G2 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.77■■□□□ 1.4
Pcdhb9E9Q5G2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhb9E9Q5G2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhb9E9Q5G2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhb9E9Q5G2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb9E9Q5G2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb9E9Q5G2 Wdr70-203ENSMUST00000227371 1130 ntBASIC23.76■■□□□ 1.39
Pcdhb9E9Q5G2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb9E9Q5G2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb9E9Q5G2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb9E9Q5G2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb9E9Q5G2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb9E9Q5G2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb9E9Q5G2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb9E9Q5G2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Pcdhb9E9Q5G2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC23.75■■□□□ 1.39
Pcdhb9E9Q5G2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
Pcdhb9E9Q5G2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb9E9Q5G2 Spcs1-204ENSMUST00000226782 949 ntBASIC23.75■■□□□ 1.39
Pcdhb9E9Q5G2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb9E9Q5G2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb9E9Q5G2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb9E9Q5G2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC23.75■■□□□ 1.39
Pcdhb9E9Q5G2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb9E9Q5G2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb9E9Q5G2 Gm10209-201ENSMUST00000203397 1607 ntBASIC23.74■■□□□ 1.39
Pcdhb9E9Q5G2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC23.74■■□□□ 1.39
Pcdhb9E9Q5G2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb9E9Q5G2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb9E9Q5G2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Pcdhb9E9Q5G2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb9E9Q5G2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb9E9Q5G2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb9E9Q5G2 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.73■■□□□ 1.39
Pcdhb9E9Q5G2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb9E9Q5G2 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Pcdhb9E9Q5G2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb9E9Q5G2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb9E9Q5G2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
Pcdhb9E9Q5G2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb9E9Q5G2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb9E9Q5G2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb9E9Q5G2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Pcdhb9E9Q5G2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhb9E9Q5G2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhb9E9Q5G2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhb9E9Q5G2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhb9E9Q5G2 Gm7160-202ENSMUST00000188519 1027 ntBASIC23.72■■□□□ 1.39
Pcdhb9E9Q5G2 Gm8493-201ENSMUST00000196881 489 ntBASIC23.72■■□□□ 1.39
Pcdhb9E9Q5G2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhb9E9Q5G2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.72■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms