Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.1■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Gm5786-201ENSMUST00000085368 882 ntBASIC17.1■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.09■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.09■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav15d-1-dv6d-1A0A075B624 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Golph3-202ENSMUST00000226517 2359 ntBASIC17.07■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.06■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.06■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.06■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Iqck-206ENSMUST00000208658 2891 ntBASIC17.03■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.02■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav15d-1-dv6d-1A0A075B624 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms