Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Nln-205ENSMUST00000224945 2486 ntBASIC9.93□□□□□ -0.82
Rfx3P48381 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Rfx3P48381 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Rfx3P48381 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Rfx3P48381 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Gm6714-201ENSMUST00000218677 2330 ntBASIC9.93□□□□□ -0.82
Rfx3P48381 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rfx3P48381 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Gm19040-201ENSMUST00000203280 4726 ntBASIC9.92□□□□□ -0.82
Rfx3P48381 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Rfx3P48381 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC9.92□□□□□ -0.82
Rfx3P48381 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC9.92□□□□□ -0.82
Rfx3P48381 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.92□□□□□ -0.82
Rfx3P48381 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.92□□□□□ -0.82
Rfx3P48381 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Rfx3P48381 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Gm25148-201ENSMUST00000104611 123 ntBASIC9.92□□□□□ -0.82
Rfx3P48381 Gm12165-201ENSMUST00000117047 342 ntBASIC9.92□□□□□ -0.82
Rfx3P48381 Gm8111-201ENSMUST00000117659 987 ntBASIC9.92□□□□□ -0.82
Rfx3P48381 Gm14263-201ENSMUST00000117955 746 ntBASIC9.92□□□□□ -0.82
Rfx3P48381 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.92□□□□□ -0.82
Rfx3P48381 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Rfx3P48381 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Rfx3P48381 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Rfx3P48381 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Rfx3P48381 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Rfx3P48381 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Gm17825-201ENSMUST00000206836 794 ntBASIC9.92□□□□□ -0.82
Rfx3P48381 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC9.92□□□□□ -0.82
Rfx3P48381 CT030170.2-201ENSMUST00000223267 126 ntBASIC9.92□□□□□ -0.82
Rfx3P48381 CT573047.1-201ENSMUST00000223652 851 ntBASIC9.92□□□□□ -0.82
Rfx3P48381 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Rfx3P48381 Olfr584-201ENSMUST00000098210 964 ntBASIC9.92□□□□□ -0.82
Rfx3P48381 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Rfx3P48381 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.92□□□□□ -0.82
Rfx3P48381 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Rfx3P48381 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC9.92□□□□□ -0.82
Rfx3P48381 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Rfx3P48381 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Rfx3P48381 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rfx3P48381 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC9.92□□□□□ -0.82
Rfx3P48381 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC9.91□□□□□ -0.82
Rfx3P48381 AC155245.1-201ENSMUST00000222266 1804 ntBASIC9.91□□□□□ -0.82
Rfx3P48381 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Rfx3P48381 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Rfx3P48381 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rfx3P48381 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Rfx3P48381 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rfx3P48381 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rfx3P48381 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.91□□□□□ -0.82
Rfx3P48381 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.91□□□□□ -0.82
Rfx3P48381 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.91□□□□□ -0.82
Rfx3P48381 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rfx3P48381 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rfx3P48381 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rfx3P48381 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rfx3P48381 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rfx3P48381 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rfx3P48381 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rfx3P48381 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Rfx3P48381 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC9.91□□□□□ -0.82
Rfx3P48381 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Rfx3P48381 Pask-201ENSMUST00000027493 5779 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms