Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ATF1P18846 LINC01165-201ENST00000445190 1623 ntBASIC12.48□□□□□ -0.41
ATF1P18846 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATF1P18846 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATF1P18846 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.47□□□□□ -0.41
ATF1P18846 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ATF1P18846 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.47□□□□□ -0.41
ATF1P18846 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATF1P18846 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATF1P18846 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.47□□□□□ -0.41
ATF1P18846 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.47□□□□□ -0.41
ATF1P18846 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.47□□□□□ -0.41
ATF1P18846 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ATF1P18846 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATF1P18846 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATF1P18846 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.47□□□□□ -0.41
ATF1P18846 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.47□□□□□ -0.41
ATF1P18846 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.47□□□□□ -0.41
ATF1P18846 GOLGA2P5-201ENST00000266746 2395 ntBASIC12.47□□□□□ -0.41
ATF1P18846 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.47□□□□□ -0.41
ATF1P18846 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.47□□□□□ -0.41
ATF1P18846 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
ATF1P18846 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATF1P18846 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATF1P18846 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
ATF1P18846 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
ATF1P18846 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATF1P18846 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATF1P18846 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.47□□□□□ -0.41
ATF1P18846 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ATF1P18846 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.47□□□□□ -0.41
ATF1P18846 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.47□□□□□ -0.41
ATF1P18846 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ATF1P18846 INE1-201ENST00000456273 945 ntBASIC12.47□□□□□ -0.41
ATF1P18846 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
ATF1P18846 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC12.47□□□□□ -0.41
ATF1P18846 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATF1P18846 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.47□□□□□ -0.41
ATF1P18846 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.47□□□□□ -0.41
ATF1P18846 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.47□□□□□ -0.41
ATF1P18846 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC12.47□□□□□ -0.41
ATF1P18846 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
ATF1P18846 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.47□□□□□ -0.41
ATF1P18846 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.47□□□□□ -0.41
ATF1P18846 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.47□□□□□ -0.41
ATF1P18846 AC027307.3-201ENST00000594262 1100 ntBASIC12.47□□□□□ -0.41
ATF1P18846 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATF1P18846 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.47□□□□□ -0.41
ATF1P18846 AC244669.2-201ENST00000612320 853 ntBASIC12.47□□□□□ -0.41
ATF1P18846 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
ATF1P18846 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATF1P18846 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATF1P18846 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATF1P18846 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATF1P18846 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.47□□□□□ -0.41
ATF1P18846 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ATF1P18846 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ATF1P18846 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
ATF1P18846 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ATF1P18846 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATF1P18846 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.46□□□□□ -0.41
ATF1P18846 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATF1P18846 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATF1P18846 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATF1P18846 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.46□□□□□ -0.41
ATF1P18846 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
ATF1P18846 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ATF1P18846 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATF1P18846 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATF1P18846 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
ATF1P18846 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATF1P18846 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATF1P18846 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.46□□□□□ -0.41
ATF1P18846 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATF1P18846 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.46□□□□□ -0.41
ATF1P18846 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATF1P18846 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ATF1P18846 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATF1P18846 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATF1P18846 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATF1P18846 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATF1P18846 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATF1P18846 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.46□□□□□ -0.41
ATF1P18846 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.46□□□□□ -0.41
ATF1P18846 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC12.46□□□□□ -0.41
ATF1P18846 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
ATF1P18846 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.46□□□□□ -0.41
ATF1P18846 CNN2P8-201ENST00000421872 913 ntBASIC12.46□□□□□ -0.41
ATF1P18846 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.46□□□□□ -0.41
ATF1P18846 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.46□□□□□ -0.41
ATF1P18846 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
ATF1P18846 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.46□□□□□ -0.41
ATF1P18846 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
ATF1P18846 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.46□□□□□ -0.41
ATF1P18846 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.46□□□□□ -0.41
ATF1P18846 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.46□□□□□ -0.41
ATF1P18846 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ATF1P18846 ZACNP1-201ENST00000612259 710 ntBASIC12.46□□□□□ -0.41
ATF1P18846 AL136301.1-201ENST00000615830 422 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms