Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDK5Q00535 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDK5Q00535 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDK5Q00535 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.81□□□□□ -0.36
CDK5Q00535 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDK5Q00535 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CDK5Q00535 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDK5Q00535 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDK5Q00535 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDK5Q00535 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CDK5Q00535 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDK5Q00535 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.81□□□□□ -0.36
CDK5Q00535 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.81□□□□□ -0.36
CDK5Q00535 PCDHB19P-202ENST00000625133 2914 ntBASIC12.81□□□□□ -0.36
CDK5Q00535 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDK5Q00535 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDK5Q00535 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDK5Q00535 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CDK5Q00535 AP006294.1-201ENST00000415407 339 ntBASIC12.81□□□□□ -0.36
CDK5Q00535 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.81□□□□□ -0.36
CDK5Q00535 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.81□□□□□ -0.36
CDK5Q00535 AC007389.4-201ENST00000454674 793 ntBASIC12.81□□□□□ -0.36
CDK5Q00535 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.81□□□□□ -0.36
CDK5Q00535 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.81□□□□□ -0.36
CDK5Q00535 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDK5Q00535 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.81□□□□□ -0.36
CDK5Q00535 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.81□□□□□ -0.36
CDK5Q00535 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.81□□□□□ -0.36
CDK5Q00535 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.81□□□□□ -0.36
CDK5Q00535 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.81□□□□□ -0.36
CDK5Q00535 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.81□□□□□ -0.36
CDK5Q00535 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.81□□□□□ -0.36
CDK5Q00535 AC015936.2-201ENST00000593177 259 ntBASIC12.81□□□□□ -0.36
CDK5Q00535 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC12.81□□□□□ -0.36
CDK5Q00535 AC009955.4-201ENST00000597192 544 ntBASIC12.81□□□□□ -0.36
CDK5Q00535 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.81□□□□□ -0.36
CDK5Q00535 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CDK5Q00535 AL022328.1-201ENST00000610050 478 ntBASIC12.81□□□□□ -0.36
CDK5Q00535 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.81□□□□□ -0.36
CDK5Q00535 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.81□□□□□ -0.36
CDK5Q00535 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CDK5Q00535 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CDK5Q00535 Z98259.2-201ENST00000641583 609 ntBASIC12.81□□□□□ -0.36
CDK5Q00535 LINC00567-201ENST00000569854 3409 ntBASIC12.81□□□□□ -0.36
CDK5Q00535 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDK5Q00535 MARK2P16-201ENST00000605714 1723 ntBASIC12.81□□□□□ -0.36
CDK5Q00535 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDK5Q00535 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDK5Q00535 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.81□□□□□ -0.36
CDK5Q00535 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.81□□□□□ -0.36
CDK5Q00535 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDK5Q00535 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
CDK5Q00535 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.81□□□□□ -0.36
CDK5Q00535 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.81□□□□□ -0.36
CDK5Q00535 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CDK5Q00535 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CDK5Q00535 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
CDK5Q00535 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CDK5Q00535 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CDK5Q00535 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CDK5Q00535 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.8□□□□□ -0.36
CDK5Q00535 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.8□□□□□ -0.36
CDK5Q00535 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.8□□□□□ -0.36
CDK5Q00535 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.8□□□□□ -0.36
CDK5Q00535 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.8□□□□□ -0.36
CDK5Q00535 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
CDK5Q00535 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.8□□□□□ -0.36
CDK5Q00535 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CDK5Q00535 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CDK5Q00535 MIR1202-201ENST00000408529 83 ntBASIC12.8□□□□□ -0.36
CDK5Q00535 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.8□□□□□ -0.36
CDK5Q00535 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.8□□□□□ -0.36
CDK5Q00535 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 HIST2H2BB-201ENST00000449108 381 ntBASIC12.8□□□□□ -0.36
CDK5Q00535 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC12.8□□□□□ -0.36
CDK5Q00535 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 RN7SL837P-201ENST00000463010 287 ntBASIC12.8□□□□□ -0.36
CDK5Q00535 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.8□□□□□ -0.36
CDK5Q00535 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.8□□□□□ -0.36
CDK5Q00535 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
CDK5Q00535 KRT90P-201ENST00000549264 1064 ntBASIC12.8□□□□□ -0.36
CDK5Q00535 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CDK5Q00535 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CDK5Q00535 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
CDK5Q00535 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms