Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 AC097474.1-201ENST00000506481 1371 ntBASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 RBPMSLP-201ENST00000433427 502 ntBASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 RN7SL794P-201ENST00000469816 280 ntBASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 RNF7-205ENST00000480908 782 ntTSL 4 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 ALDOAP1-201ENST00000491506 1078 ntBASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 TLE2-205ENST00000586422 389 ntTSL 5 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
VPS13DQ5THJ4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 RN7SL22P-201ENST00000471800 269 ntBASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 COG6-212ENST00000630730 186 ntTSL 5 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 CDIPT-AS1-203ENST00000638164 713 ntBASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 AL031577.1-201ENST00000339867 399 ntBASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 AL136298.3-201ENST00000556746 445 ntBASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 AL121994.1-201ENST00000413189 402 ntBASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 DUX4L33-201ENST00000635217 958 ntBASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC9.13□□□□□ -0.95
VPS13DQ5THJ4 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 AC007622.1-201ENST00000488371 535 ntBASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 GOLGA8EP-201ENST00000530246 1959 ntBASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 AC106881.1-201ENST00000605849 3329 ntBASIC9.12□□□□□ -0.95
VPS13DQ5THJ4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms