Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.23□□□□□ -0.29
HTR3AP46098 MIR4741-201ENST00000579822 90 ntBASIC13.23□□□□□ -0.29
HTR3AP46098 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.23□□□□□ -0.29
HTR3AP46098 AC104506.1-201ENST00000609247 429 ntBASIC13.23□□□□□ -0.29
HTR3AP46098 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
HTR3AP46098 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HTR3AP46098 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.23□□□□□ -0.29
HTR3AP46098 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HTR3AP46098 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.23□□□□□ -0.29
HTR3AP46098 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HTR3AP46098 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
HTR3AP46098 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
HTR3AP46098 AP002761.4-201ENST00000565433 3361 ntBASIC13.23□□□□□ -0.29
HTR3AP46098 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HTR3AP46098 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
HTR3AP46098 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
HTR3AP46098 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HTR3AP46098 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.22□□□□□ -0.29
HTR3AP46098 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.22□□□□□ -0.29
HTR3AP46098 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HTR3AP46098 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
HTR3AP46098 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HTR3AP46098 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
HTR3AP46098 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.22□□□□□ -0.29
HTR3AP46098 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
HTR3AP46098 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.22□□□□□ -0.29
HTR3AP46098 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
HTR3AP46098 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.22□□□□□ -0.29
HTR3AP46098 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.22□□□□□ -0.29
HTR3AP46098 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.22□□□□□ -0.29
HTR3AP46098 ATP5G2P4-201ENST00000442175 420 ntBASIC13.22□□□□□ -0.29
HTR3AP46098 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 TUBB8P8-201ENST00000458717 1058 ntBASIC13.22□□□□□ -0.29
HTR3AP46098 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.22□□□□□ -0.29
HTR3AP46098 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.22□□□□□ -0.29
HTR3AP46098 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.22□□□□□ -0.29
HTR3AP46098 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.22□□□□□ -0.29
HTR3AP46098 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.22□□□□□ -0.29
HTR3AP46098 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HTR3AP46098 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.22□□□□□ -0.29
HTR3AP46098 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
HTR3AP46098 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.22□□□□□ -0.29
HTR3AP46098 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
HTR3AP46098 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
HTR3AP46098 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.22□□□□□ -0.29
HTR3AP46098 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
HTR3AP46098 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.22□□□□□ -0.29
HTR3AP46098 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.21□□□□□ -0.29
HTR3AP46098 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HTR3AP46098 AC244394.1-201ENST00000435000 1665 ntBASIC13.21□□□□□ -0.29
HTR3AP46098 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
HTR3AP46098 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
HTR3AP46098 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
HTR3AP46098 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HTR3AP46098 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
HTR3AP46098 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.21□□□□□ -0.29
HTR3AP46098 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
HTR3AP46098 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
HTR3AP46098 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HTR3AP46098 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
HTR3AP46098 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
HTR3AP46098 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HTR3AP46098 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
HTR3AP46098 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HTR3AP46098 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
HTR3AP46098 DMBT1P1-203ENST00000636837 4628 ntBASIC13.21□□□□□ -0.29
HTR3AP46098 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
HTR3AP46098 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HTR3AP46098 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
HTR3AP46098 AL645933.1-201ENST00000440087 609 ntBASIC13.21□□□□□ -0.29
HTR3AP46098 MTX1P1-201ENST00000440904 838 ntBASIC13.21□□□□□ -0.29
HTR3AP46098 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.21□□□□□ -0.29
HTR3AP46098 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms