Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLHC1Q8NHS4 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLHC1Q8NHS4 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
CLHC1Q8NHS4 DGCR9-201ENST00000609630 2415 ntBASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 AC020658.7-201ENST00000624274 2442 ntBASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 HOMER2P2-201ENST00000451621 847 ntBASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 MIR6720-201ENST00000611664 98 ntBASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 AGAP12P-201ENST00000585227 2359 ntBASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 TCAF1P1-201ENST00000414990 2232 ntBASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 NCLP1-201ENST00000445357 1963 ntBASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLHC1Q8NHS4 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 AC244394.1-201ENST00000435000 1665 ntBASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 AC026954.1-201ENST00000429771 1293 ntBASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 AC092053.3-201ENST00000641308 4975 ntBASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.75□□□□□ -0.21
CLHC1Q8NHS4 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms