Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC15.71■□□□□ 0.11
RFC5P40937 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.71■□□□□ 0.11
RFC5P40937 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.71■□□□□ 0.11
RFC5P40937 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC5P40937 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFC5P40937 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.71■□□□□ 0.11
RFC5P40937 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RFC5P40937 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFC5P40937 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
RFC5P40937 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
RFC5P40937 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
RFC5P40937 CICP20-201ENST00000443330 2801 ntBASIC15.71■□□□□ 0.1
RFC5P40937 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
RFC5P40937 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.71■□□□□ 0.1
RFC5P40937 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.71■□□□□ 0.1
RFC5P40937 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.7■□□□□ 0.1
RFC5P40937 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 DUT-208ENST00000559540 1441 ntTSL 2 BASIC15.7■□□□□ 0.1
RFC5P40937 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RFC5P40937 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RFC5P40937 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.7■□□□□ 0.1
RFC5P40937 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.7■□□□□ 0.1
RFC5P40937 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
RFC5P40937 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.7■□□□□ 0.1
RFC5P40937 AP000356.3-201ENST00000382243 753 ntBASIC15.7■□□□□ 0.1
RFC5P40937 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.7■□□□□ 0.1
RFC5P40937 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC15.7■□□□□ 0.1
RFC5P40937 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.7■□□□□ 0.1
RFC5P40937 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.7■□□□□ 0.1
RFC5P40937 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.7■□□□□ 0.1
RFC5P40937 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.7■□□□□ 0.1
RFC5P40937 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.7■□□□□ 0.1
RFC5P40937 RN7SL455P-201ENST00000580629 282 ntBASIC15.7■□□□□ 0.1
RFC5P40937 SIGLEC22P-201ENST00000599104 714 ntBASIC15.7■□□□□ 0.1
RFC5P40937 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.7■□□□□ 0.1
RFC5P40937 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.7■□□□□ 0.1
RFC5P40937 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RFC5P40937 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RFC5P40937 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFC5P40937 AC006480.2-201ENST00000609770 1337 ntBASIC15.69■□□□□ 0.1
RFC5P40937 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC5P40937 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.69■□□□□ 0.1
RFC5P40937 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC5P40937 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC5P40937 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RFC5P40937 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC5P40937 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC5P40937 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFC5P40937 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RFC5P40937 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.69■□□□□ 0.1
RFC5P40937 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC5P40937 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFC5P40937 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC5P40937 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC5P40937 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC5P40937 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RFC5P40937 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFC5P40937 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFC5P40937 SAT1-201ENST00000379251 801 ntTSL 2 BASIC15.69■□□□□ 0.1
RFC5P40937 SAT1-202ENST00000379253 909 ntTSL 2 BASIC15.69■□□□□ 0.1
RFC5P40937 SAT1-203ENST00000379254 868 ntTSL 3 BASIC15.69■□□□□ 0.1
RFC5P40937 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFC5P40937 AL512430.1-201ENST00000392575 860 ntBASIC15.69■□□□□ 0.1
RFC5P40937 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.69■□□□□ 0.1
RFC5P40937 LINC00265-2P-201ENST00000413372 782 ntBASIC15.69■□□□□ 0.1
RFC5P40937 DNAJB1P1-201ENST00000429417 1024 ntBASIC15.69■□□□□ 0.1
RFC5P40937 AL512306.1-201ENST00000432698 848 ntBASIC15.69■□□□□ 0.1
RFC5P40937 AC098934.1-203ENST00000442868 1262 ntBASIC15.69■□□□□ 0.1
RFC5P40937 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.69■□□□□ 0.1
RFC5P40937 ORAOV1P1-201ENST00000503108 395 ntBASIC15.69■□□□□ 0.1
RFC5P40937 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC15.69■□□□□ 0.1
RFC5P40937 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
RFC5P40937 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFC5P40937 POLD4-208ENST00000532830 904 ntTSL 3 BASIC15.69■□□□□ 0.1
RFC5P40937 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFC5P40937 AC138701.2-201ENST00000553634 226 ntBASIC15.69■□□□□ 0.1
RFC5P40937 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.69■□□□□ 0.1
RFC5P40937 AL031713.1-201ENST00000564813 661 ntBASIC15.69■□□□□ 0.1
RFC5P40937 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms