Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.3■□□□□ 0.04
CTAGE9A4FU28 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 INE1-201ENST00000456273 945 ntBASIC15.3■□□□□ 0.04
CTAGE9A4FU28 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 AC104596.2-201ENST00000512793 793 ntBASIC15.3■□□□□ 0.04
CTAGE9A4FU28 DOC2GP-202ENST00000514950 1163 ntBASIC15.3■□□□□ 0.04
CTAGE9A4FU28 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 AC004790.1-201ENST00000612686 536 ntBASIC15.3■□□□□ 0.04
CTAGE9A4FU28 AC008761.3-201ENST00000624803 892 ntBASIC15.3■□□□□ 0.04
CTAGE9A4FU28 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC15.3■□□□□ 0.04
CTAGE9A4FU28 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 AL359711.2-201ENST00000563105 872 ntBASIC15.29■□□□□ 0.04
CTAGE9A4FU28 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 AL022323.5-201ENST00000624101 2059 ntBASIC15.29■□□□□ 0.04
CTAGE9A4FU28 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CTAGE9A4FU28 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 AP003969.2-201ENST00000623739 2275 ntBASIC15.28■□□□□ 0.04
CTAGE9A4FU28 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 AGGF1P10-201ENST00000635005 2191 ntBASIC15.28■□□□□ 0.04
CTAGE9A4FU28 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CTAGE9A4FU28 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms