Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.51□□□□□ -0.41
Rrp1P56183 Gm43068-201ENSMUST00000201095 1273 ntBASIC12.51□□□□□ -0.41
Rrp1P56183 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.51□□□□□ -0.41
Rrp1P56183 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC12.51□□□□□ -0.41
Rrp1P56183 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.51□□□□□ -0.41
Rrp1P56183 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rrp1P56183 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Rrp1P56183 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rrp1P56183 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC12.51□□□□□ -0.41
Rrp1P56183 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rrp1P56183 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
Rrp1P56183 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC12.51□□□□□ -0.41
Rrp1P56183 AC154528.2-201ENSMUST00000228432 3023 ntBASIC12.51□□□□□ -0.41
Rrp1P56183 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC12.51□□□□□ -0.41
Rrp1P56183 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rrp1P56183 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rrp1P56183 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rrp1P56183 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rrp1P56183 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rrp1P56183 Gm22711-201ENSMUST00000116890 133 ntBASIC12.5□□□□□ -0.41
Rrp1P56183 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.5□□□□□ -0.41
Rrp1P56183 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.5□□□□□ -0.41
Rrp1P56183 Gm11244-201ENSMUST00000121243 237 ntBASIC12.5□□□□□ -0.41
Rrp1P56183 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rrp1P56183 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rrp1P56183 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.5□□□□□ -0.41
Rrp1P56183 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.5□□□□□ -0.41
Rrp1P56183 Gm26461-201ENSMUST00000175064 290 ntBASIC12.5□□□□□ -0.41
Rrp1P56183 Mir5132-201ENSMUST00000175166 71 ntBASIC12.5□□□□□ -0.41
Rrp1P56183 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Rrp1P56183 Gm23694-201ENSMUST00000179335 110 ntBASIC12.5□□□□□ -0.41
Rrp1P56183 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.5□□□□□ -0.41
Rrp1P56183 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.5□□□□□ -0.41
Rrp1P56183 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.5□□□□□ -0.41
Rrp1P56183 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rrp1P56183 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rrp1P56183 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rrp1P56183 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Rrp1P56183 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rrp1P56183 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.5□□□□□ -0.41
Rrp1P56183 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.5□□□□□ -0.41
Rrp1P56183 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rrp1P56183 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rrp1P56183 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rrp1P56183 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rrp1P56183 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rrp1P56183 Gm37264-201ENSMUST00000194916 2192 ntBASIC12.5□□□□□ -0.41
Rrp1P56183 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rrp1P56183 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rrp1P56183 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rrp1P56183 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rrp1P56183 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rrp1P56183 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rrp1P56183 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Rrp1P56183 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC12.49□□□□□ -0.41
Rrp1P56183 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rrp1P56183 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rrp1P56183 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rrp1P56183 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rrp1P56183 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rrp1P56183 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rrp1P56183 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rrp1P56183 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Rrp1P56183 Gm42851-201ENSMUST00000201325 1411 ntBASIC12.49□□□□□ -0.41
Rrp1P56183 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.49□□□□□ -0.41
Rrp1P56183 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.49□□□□□ -0.41
Rrp1P56183 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rrp1P56183 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.49□□□□□ -0.41
Rrp1P56183 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.49□□□□□ -0.41
Rrp1P56183 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.49□□□□□ -0.41
Rrp1P56183 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.49□□□□□ -0.41
Rrp1P56183 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rrp1P56183 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC12.49□□□□□ -0.41
Rrp1P56183 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.49□□□□□ -0.41
Rrp1P56183 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.49□□□□□ -0.41
Rrp1P56183 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rrp1P56183 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rrp1P56183 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rrp1P56183 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rrp1P56183 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rrp1P56183 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rrp1P56183 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rrp1P56183 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rrp1P56183 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rrp1P56183 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rrp1P56183 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rrp1P56183 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rrp1P56183 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms