Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.12■□□□□ 0.01
CHRNA3P32297 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.12■□□□□ 0.01
CHRNA3P32297 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.12■□□□□ 0.01
CHRNA3P32297 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.12■□□□□ 0.01
CHRNA3P32297 MIR4683-201ENST00000579659 81 ntBASIC15.12■□□□□ 0.01
CHRNA3P32297 KRT18P8-201ENST00000581937 1246 ntBASIC15.12■□□□□ 0.01
CHRNA3P32297 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.12■□□□□ 0.01
CHRNA3P32297 AC243960.2-201ENST00000600996 747 ntBASIC15.12■□□□□ 0.01
CHRNA3P32297 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
CHRNA3P32297 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CHRNA3P32297 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA3P32297 AL031595.1-201ENST00000623969 4709 ntBASIC15.12■□□□□ 0.01
CHRNA3P32297 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA3P32297 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA3P32297 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC15.12■□□□□ 0.01
CHRNA3P32297 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.12■□□□□ 0.01
CHRNA3P32297 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRNA3P32297 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CHRNA3P32297 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA3P32297 AC020907.1-201ENST00000616460 1350 ntBASIC15.11■□□□□ 0.01
CHRNA3P32297 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CHRNA3P32297 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA3P32297 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRNA3P32297 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA3P32297 AC009093.10-201ENST00000641956 1442 ntBASIC15.11■□□□□ 0.01
CHRNA3P32297 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CHRNA3P32297 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.11■□□□□ 0.01
CHRNA3P32297 TP73-207ENST00000378290 1831 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRNA3P32297 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA3P32297 AC004241.5-201ENST00000623870 2448 ntBASIC15.11■□□□□ 0.01
CHRNA3P32297 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA3P32297 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRNA3P32297 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA3P32297 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA3P32297 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.11■□□□□ 0.01
CHRNA3P32297 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.11■□□□□ 0.01
CHRNA3P32297 MIR663B-201ENST00000408361 115 ntBASIC15.11■□□□□ 0.01
CHRNA3P32297 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRNA3P32297 AC022494.1-201ENST00000466044 728 ntBASIC15.11■□□□□ 0.01
CHRNA3P32297 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA3P32297 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.11■□□□□ 0.01
CHRNA3P32297 AC100850.1-201ENST00000506768 649 ntBASIC15.11■□□□□ 0.01
CHRNA3P32297 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA3P32297 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CHRNA3P32297 AL022328.3-201ENST00000607943 679 ntBASIC15.11■□□□□ 0.01
CHRNA3P32297 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.11■□□□□ 0.01
CHRNA3P32297 AC002472.3-201ENST00000640124 621 ntBASIC15.11■□□□□ 0.01
CHRNA3P32297 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA3P32297 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA3P32297 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.11■□□□□ 0.01
CHRNA3P32297 NUTM2HP-201ENST00000442076 2498 ntBASIC15.11■□□□□ 0.01
CHRNA3P32297 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA3P32297 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.11■□□□□ 0.01
CHRNA3P32297 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA3P32297 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA3P32297 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.11■□□□□ 0.01
CHRNA3P32297 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA3P32297 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA3P32297 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.11■□□□□ 0.01
CHRNA3P32297 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRNA3P32297 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CHRNA3P32297 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA3P32297 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA3P32297 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA3P32297 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRNA3P32297 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRNA3P32297 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA3P32297 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.1■□□□□ 0.01
CHRNA3P32297 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA3P32297 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CHRNA3P32297 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA3P32297 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC15.1■□□□□ 0.01
CHRNA3P32297 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.1■□□□□ 0.01
CHRNA3P32297 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA3P32297 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA3P32297 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA3P32297 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.1■□□□□ 0.01
CHRNA3P32297 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA3P32297 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.1■□□□□ 0.01
CHRNA3P32297 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CHRNA3P32297 AC006033.1-201ENST00000440505 426 ntBASIC15.1■□□□□ 0.01
CHRNA3P32297 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.1■□□□□ 0.01
CHRNA3P32297 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.1■□□□□ 0.01
CHRNA3P32297 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.1■□□□□ 0.01
CHRNA3P32297 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA3P32297 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.1■□□□□ 0.01
CHRNA3P32297 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.1■□□□□ 0.01
CHRNA3P32297 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.1■□□□□ 0.01
CHRNA3P32297 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.1■□□□□ 0.01
CHRNA3P32297 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.1■□□□□ 0.01
CHRNA3P32297 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA3P32297 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.1■□□□□ 0.01
CHRNA3P32297 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.1■□□□□ 0.01
CHRNA3P32297 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.1■□□□□ 0.01
CHRNA3P32297 MIR6787-201ENST00000616675 61 ntBASIC15.1■□□□□ 0.01
CHRNA3P32297 AL008638.5-201ENST00000623814 1298 ntBASIC15.1■□□□□ 0.01
CHRNA3P32297 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRNA3P32297 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CHRNA3P32297 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CHRNA3P32297 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms