Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 CR382287.1-201ENST00000623954 586 ntBASIC11.74□□□□□ -0.53
DEFA4P12838 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
DEFA4P12838 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
DEFA4P12838 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
DEFA4P12838 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
DEFA4P12838 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
DEFA4P12838 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC11.74□□□□□ -0.53
DEFA4P12838 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC11.74□□□□□ -0.53
DEFA4P12838 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
DEFA4P12838 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
DEFA4P12838 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
DEFA4P12838 AC020910.6-201ENST00000623084 1459 ntBASIC11.74□□□□□ -0.53
DEFA4P12838 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
DEFA4P12838 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC11.74□□□□□ -0.53
DEFA4P12838 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
DEFA4P12838 AC015688.4-201ENST00000580780 1647 ntBASIC11.74□□□□□ -0.53
DEFA4P12838 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC11.74□□□□□ -0.53
DEFA4P12838 HADH-202ENST00000403312 1752 ntTSL 5 BASIC11.74□□□□□ -0.53
DEFA4P12838 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC11.74□□□□□ -0.53
DEFA4P12838 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC11.74□□□□□ -0.53
DEFA4P12838 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC11.74□□□□□ -0.53
DEFA4P12838 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
DEFA4P12838 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
DEFA4P12838 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC11.73□□□□□ -0.53
DEFA4P12838 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC11.73□□□□□ -0.53
DEFA4P12838 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
DEFA4P12838 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
DEFA4P12838 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC11.73□□□□□ -0.53
DEFA4P12838 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
DEFA4P12838 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
DEFA4P12838 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC11.73□□□□□ -0.53
DEFA4P12838 CROT-203ENST00000419147 2959 ntTSL 2 BASIC11.73□□□□□ -0.53
DEFA4P12838 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC11.73□□□□□ -0.53
DEFA4P12838 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
DEFA4P12838 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC11.73□□□□□ -0.53
DEFA4P12838 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 TMEM198B-204ENST00000484016 896 ntBASIC11.73□□□□□ -0.53
DEFA4P12838 FTLP10-202ENST00000505798 471 ntBASIC11.73□□□□□ -0.53
DEFA4P12838 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC11.73□□□□□ -0.53
DEFA4P12838 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC11.73□□□□□ -0.53
DEFA4P12838 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC11.73□□□□□ -0.53
DEFA4P12838 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC11.73□□□□□ -0.53
DEFA4P12838 RN7SL48P-201ENST00000579283 293 ntBASIC11.73□□□□□ -0.53
DEFA4P12838 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC11.73□□□□□ -0.53
DEFA4P12838 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC11.73□□□□□ -0.53
DEFA4P12838 RN7SL832P-201ENST00000607781 1756 ntBASIC11.73□□□□□ -0.53
DEFA4P12838 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
DEFA4P12838 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
DEFA4P12838 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
DEFA4P12838 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
DEFA4P12838 AL139385.1-201ENST00000611744 3272 ntBASIC11.73□□□□□ -0.53
DEFA4P12838 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
DEFA4P12838 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
DEFA4P12838 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
DEFA4P12838 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
DEFA4P12838 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
DEFA4P12838 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC11.72□□□□□ -0.53
DEFA4P12838 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
DEFA4P12838 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC11.72□□□□□ -0.53
DEFA4P12838 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
DEFA4P12838 AC011498.7-201ENST00000624986 2027 ntBASIC11.72□□□□□ -0.53
DEFA4P12838 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
DEFA4P12838 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC11.72□□□□□ -0.53
DEFA4P12838 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.72□□□□□ -0.53
DEFA4P12838 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
DEFA4P12838 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
DEFA4P12838 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
DEFA4P12838 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC11.72□□□□□ -0.53
DEFA4P12838 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
DEFA4P12838 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
DEFA4P12838 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
DEFA4P12838 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC11.72□□□□□ -0.53
DEFA4P12838 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC11.72□□□□□ -0.53
DEFA4P12838 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
DEFA4P12838 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
DEFA4P12838 FKBP4P6-201ENST00000457486 1332 ntBASIC11.72□□□□□ -0.53
DEFA4P12838 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
DEFA4P12838 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms