Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
VTNP04004 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VTNP04004 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
VTNP04004 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
VTNP04004 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VTNP04004 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.58■□□□□ 0.08
VTNP04004 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
VTNP04004 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VTNP04004 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC15.58■□□□□ 0.08
VTNP04004 RPL13AP3-202ENST00000494676 1473 ntBASIC15.58■□□□□ 0.08
VTNP04004 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VTNP04004 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VTNP04004 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
VTNP04004 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
VTNP04004 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.58■□□□□ 0.08
VTNP04004 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VTNP04004 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
VTNP04004 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
VTNP04004 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.58■□□□□ 0.08
VTNP04004 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.58■□□□□ 0.08
VTNP04004 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC15.57■□□□□ 0.08
VTNP04004 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VTNP04004 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
VTNP04004 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
VTNP04004 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.57■□□□□ 0.08
VTNP04004 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VTNP04004 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VTNP04004 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.57■□□□□ 0.08
VTNP04004 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
VTNP04004 BX640514.1-201ENST00000583223 1918 ntBASIC15.57■□□□□ 0.08
VTNP04004 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VTNP04004 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VTNP04004 CICP16-201ENST00000502609 2813 ntBASIC15.57■□□□□ 0.08
VTNP04004 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.57■□□□□ 0.08
VTNP04004 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
VTNP04004 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC15.57■□□□□ 0.08
VTNP04004 CELP-201ENST00000411440 1249 ntTSL 5 BASIC15.57■□□□□ 0.08
VTNP04004 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC15.57■□□□□ 0.08
VTNP04004 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC15.57■□□□□ 0.08
VTNP04004 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.57■□□□□ 0.08
VTNP04004 LYPLA2P1-203ENST00000447689 696 ntBASIC15.57■□□□□ 0.08
VTNP04004 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.57■□□□□ 0.08
VTNP04004 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.57■□□□□ 0.08
VTNP04004 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC15.57■□□□□ 0.08
VTNP04004 CTBP2P4-201ENST00000513884 920 ntBASIC15.57■□□□□ 0.08
VTNP04004 AC068867.1-201ENST00000559855 150 ntBASIC15.57■□□□□ 0.08
VTNP04004 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.57■□□□□ 0.08
VTNP04004 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VTNP04004 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
VTNP04004 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
VTNP04004 AC105137.3-201ENST00000617588 984 ntBASIC15.57■□□□□ 0.08
VTNP04004 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
VTNP04004 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VTNP04004 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VTNP04004 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VTNP04004 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
VTNP04004 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VTNP04004 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VTNP04004 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC15.57■□□□□ 0.08
VTNP04004 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
VTNP04004 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.57■□□□□ 0.08
VTNP04004 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC15.57■□□□□ 0.08
VTNP04004 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
VTNP04004 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.57■□□□□ 0.08
VTNP04004 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VTNP04004 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VTNP04004 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VTNP04004 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
VTNP04004 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VTNP04004 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.56■□□□□ 0.08
VTNP04004 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VTNP04004 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
VTNP04004 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VTNP04004 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VTNP04004 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VTNP04004 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
VTNP04004 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
VTNP04004 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VTNP04004 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
VTNP04004 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC15.56■□□□□ 0.08
VTNP04004 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC15.56■□□□□ 0.08
VTNP04004 AC092638.2-201ENST00000441105 947 ntBASIC15.56■□□□□ 0.08
VTNP04004 PIN4P1-201ENST00000451079 396 ntBASIC15.56■□□□□ 0.08
VTNP04004 KRT18P15-201ENST00000458108 1291 ntBASIC15.56■□□□□ 0.08
VTNP04004 RN7SL788P-201ENST00000460504 316 ntBASIC15.56■□□□□ 0.08
VTNP04004 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.56■□□□□ 0.08
VTNP04004 RN7SL564P-201ENST00000496309 250 ntBASIC15.56■□□□□ 0.08
VTNP04004 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC15.56■□□□□ 0.08
VTNP04004 RN7SL357P-201ENST00000581065 298 ntBASIC15.56■□□□□ 0.08
VTNP04004 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC15.56■□□□□ 0.08
VTNP04004 AC009084.3-201ENST00000623356 437 ntBASIC15.56■□□□□ 0.08
VTNP04004 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.56■□□□□ 0.08
VTNP04004 SHMT1P1-201ENST00000419974 1312 ntBASIC15.56■□□□□ 0.08
VTNP04004 TUBB8P4-201ENST00000511806 1324 ntBASIC15.56■□□□□ 0.08
VTNP04004 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
VTNP04004 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.56■□□□□ 0.08
VTNP04004 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC15.56■□□□□ 0.08
VTNP04004 KRT8P43-201ENST00000406052 1458 ntBASIC15.56■□□□□ 0.08
VTNP04004 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
VTNP04004 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms