Protein–RNA interactions for Protein: Q8IV31

TMEM139, Transmembrane protein 139, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139Q8IV31 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 STX3-207ENST00000633708 3111 ntTSL 5 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 TDH-203ENST00000531764 1110 ntBASIC15.32■□□□□ 0.04
TMEM139Q8IV31 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 MIR4783-201ENST00000580343 82 ntBASIC15.32■□□□□ 0.04
TMEM139Q8IV31 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 AC009955.4-201ENST00000597192 544 ntBASIC15.32■□□□□ 0.04
TMEM139Q8IV31 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 C2-209ENST00000452323 1999 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC15.32■□□□□ 0.04
TMEM139Q8IV31 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 COX5BP1-201ENST00000507622 393 ntBASIC15.31■□□□□ 0.04
TMEM139Q8IV31 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 AL358781.1-202ENST00000321081 1360 ntBASIC15.31■□□□□ 0.04
TMEM139Q8IV31 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 AC008620.2-201ENST00000510294 1569 ntBASIC15.31■□□□□ 0.04
TMEM139Q8IV31 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC15.31■□□□□ 0.04
TMEM139Q8IV31 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM139Q8IV31 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC15.3■□□□□ 0.04
TMEM139Q8IV31 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
TMEM139Q8IV31 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM139Q8IV31 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
TMEM139Q8IV31 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TMEM139Q8IV31 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM139Q8IV31 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM139Q8IV31 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM139Q8IV31 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM139Q8IV31 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM139Q8IV31 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM139Q8IV31 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC15.3■□□□□ 0.04
TMEM139Q8IV31 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TMEM139Q8IV31 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms