Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 AC154290.1-201ENSMUST00000223786 1240 ntBASIC10.77□□□□□ -0.69
Fv4P11370 AC093022.1-201ENSMUST00000226949 1072 ntBASIC10.77□□□□□ -0.69
Fv4P11370 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Fv4P11370 Ginm1-202ENSMUST00000065124 300 ntBASIC10.77□□□□□ -0.69
Fv4P11370 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Fv4P11370 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Fv4P11370 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Fv4P11370 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Fv4P11370 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Fv4P11370 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Fv4P11370 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Fv4P11370 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Fv4P11370 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Fv4P11370 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Fv4P11370 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.77□□□□□ -0.69
Fv4P11370 Gm45041-201ENSMUST00000207366 3108 ntBASIC10.77□□□□□ -0.69
Fv4P11370 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Fv4P11370 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Fv4P11370 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Fv4P11370 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Fv4P11370 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.77□□□□□ -0.69
Fv4P11370 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Fv4P11370 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Fv4P11370 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.76□□□□□ -0.69
Fv4P11370 Gpr37-202ENSMUST00000200812 3035 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.76□□□□□ -0.69
Fv4P11370 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Fv4P11370 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Fv4P11370 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Gm15352-201ENSMUST00000118696 270 ntBASIC10.76□□□□□ -0.69
Fv4P11370 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.76□□□□□ -0.69
Fv4P11370 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC10.76□□□□□ -0.69
Fv4P11370 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.76□□□□□ -0.69
Fv4P11370 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.76□□□□□ -0.69
Fv4P11370 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.76□□□□□ -0.69
Fv4P11370 Mir7051-201ENSMUST00000184167 73 ntBASIC10.76□□□□□ -0.69
Fv4P11370 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.76□□□□□ -0.69
Fv4P11370 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.76□□□□□ -0.69
Fv4P11370 Gm19208-201ENSMUST00000213861 912 ntBASIC10.76□□□□□ -0.69
Fv4P11370 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.76□□□□□ -0.69
Fv4P11370 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Fv4P11370 Gm25125-201ENSMUST00000083340 136 ntBASIC10.76□□□□□ -0.69
Fv4P11370 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.76□□□□□ -0.69
Fv4P11370 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.76□□□□□ -0.69
Fv4P11370 AC107453.4-201ENSMUST00000227068 1817 ntBASIC10.76□□□□□ -0.69
Fv4P11370 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.76□□□□□ -0.69
Fv4P11370 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Fv4P11370 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Fv4P11370 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Fv4P11370 Stk38-201ENSMUST00000009138 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Fv4P11370 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Fv4P11370 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.76□□□□□ -0.69
Fv4P11370 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Fv4P11370 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Fv4P11370 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.75□□□□□ -0.69
Fv4P11370 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Fv4P11370 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Fv4P11370 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.75□□□□□ -0.69
Fv4P11370 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.75□□□□□ -0.69
Fv4P11370 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC10.75□□□□□ -0.69
Fv4P11370 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Fv4P11370 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.75□□□□□ -0.69
Fv4P11370 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Fv4P11370 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Fv4P11370 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Fv4P11370 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Fv4P11370 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Fv4P11370 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Fv4P11370 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Fv4P11370 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Fv4P11370 Gm11836-201ENSMUST00000121022 441 ntBASIC10.75□□□□□ -0.69
Fv4P11370 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Fv4P11370 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.75□□□□□ -0.69
Fv4P11370 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms