Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFPL1O75677 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RFPL1O75677 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
RFPL1O75677 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFPL1O75677 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFPL1O75677 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.42□□□□□ -0.1
RFPL1O75677 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFPL1O75677 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RFPL1O75677 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RFPL1O75677 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RFPL1O75677 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.42□□□□□ -0.1
RFPL1O75677 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFPL1O75677 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RFPL1O75677 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.41□□□□□ -0.1
RFPL1O75677 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFPL1O75677 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RFPL1O75677 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFPL1O75677 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.41□□□□□ -0.1
RFPL1O75677 AC007326.2-201ENST00000624224 7579 ntBASIC14.41□□□□□ -0.1
RFPL1O75677 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.41□□□□□ -0.1
RFPL1O75677 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.41□□□□□ -0.1
RFPL1O75677 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.41□□□□□ -0.1
RFPL1O75677 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFPL1O75677 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.41□□□□□ -0.1
RFPL1O75677 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFPL1O75677 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFPL1O75677 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RFPL1O75677 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFPL1O75677 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFPL1O75677 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFPL1O75677 TPM3P8-201ENST00000330554 643 ntBASIC14.41□□□□□ -0.1
RFPL1O75677 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFPL1O75677 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.41□□□□□ -0.1
RFPL1O75677 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.41□□□□□ -0.1
RFPL1O75677 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.41□□□□□ -0.1
RFPL1O75677 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFPL1O75677 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.41□□□□□ -0.1
RFPL1O75677 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.41□□□□□ -0.1
RFPL1O75677 C2orf69P2-201ENST00000562032 1123 ntBASIC14.41□□□□□ -0.1
RFPL1O75677 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.41□□□□□ -0.1
RFPL1O75677 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.41□□□□□ -0.1
RFPL1O75677 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFPL1O75677 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.41□□□□□ -0.1
RFPL1O75677 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.41□□□□□ -0.1
RFPL1O75677 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.41□□□□□ -0.1
RFPL1O75677 AC132938.4-201ENST00000623835 848 ntBASIC14.41□□□□□ -0.1
RFPL1O75677 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.41□□□□□ -0.1
RFPL1O75677 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.41□□□□□ -0.1
RFPL1O75677 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFPL1O75677 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFPL1O75677 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFPL1O75677 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFPL1O75677 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFPL1O75677 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RFPL1O75677 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.41□□□□□ -0.1
RFPL1O75677 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RFPL1O75677 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFPL1O75677 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.41□□□□□ -0.1
RFPL1O75677 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFPL1O75677 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFPL1O75677 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.41□□□□□ -0.1
RFPL1O75677 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.41□□□□□ -0.1
RFPL1O75677 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.4□□□□□ -0.1
RFPL1O75677 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.4□□□□□ -0.1
RFPL1O75677 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RFPL1O75677 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.4□□□□□ -0.1
RFPL1O75677 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.4□□□□□ -0.1
RFPL1O75677 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RFPL1O75677 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.4□□□□□ -0.1
RFPL1O75677 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.4□□□□□ -0.1
RFPL1O75677 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.4□□□□□ -0.1
RFPL1O75677 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.4□□□□□ -0.1
RFPL1O75677 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.4□□□□□ -0.1
RFPL1O75677 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.4□□□□□ -0.1
RFPL1O75677 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.4□□□□□ -0.1
RFPL1O75677 ECM1P1-201ENST00000604092 1279 ntBASIC14.4□□□□□ -0.1
RFPL1O75677 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.4□□□□□ -0.1
RFPL1O75677 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.4□□□□□ -0.1
RFPL1O75677 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.4□□□□□ -0.1
RFPL1O75677 AC027601.3-201ENST00000622907 509 ntBASIC14.4□□□□□ -0.1
RFPL1O75677 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RFPL1O75677 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFPL1O75677 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms