Protein–RNA interactions for Protein: Q9WU22

Ptpn4, Tyrosine-protein phosphatase non-receptor type 4, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn4Q9WU22 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ptpn4Q9WU22 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ptpn4Q9WU22 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Ptpn4Q9WU22 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ptpn4Q9WU22 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Ptpn4Q9WU22 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ptpn4Q9WU22 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.86■□□□□ 0.77
Ptpn4Q9WU22 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Ptpn4Q9WU22 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ptpn4Q9WU22 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ptpn4Q9WU22 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ptpn4Q9WU22 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ptpn4Q9WU22 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ptpn4Q9WU22 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ptpn4Q9WU22 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ptpn4Q9WU22 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ptpn4Q9WU22 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ptpn4Q9WU22 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ptpn4Q9WU22 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.84■□□□□ 0.77
Ptpn4Q9WU22 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ptpn4Q9WU22 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.84■□□□□ 0.77
Ptpn4Q9WU22 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ptpn4Q9WU22 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ptpn4Q9WU22 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ptpn4Q9WU22 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ptpn4Q9WU22 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ptpn4Q9WU22 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ptpn4Q9WU22 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ptpn4Q9WU22 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
Ptpn4Q9WU22 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Ptpn4Q9WU22 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ptpn4Q9WU22 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.83■□□□□ 0.77
Ptpn4Q9WU22 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ptpn4Q9WU22 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ptpn4Q9WU22 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ptpn4Q9WU22 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ptpn4Q9WU22 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ptpn4Q9WU22 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ptpn4Q9WU22 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ptpn4Q9WU22 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ptpn4Q9WU22 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Ptpn4Q9WU22 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ptpn4Q9WU22 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.82■□□□□ 0.76
Ptpn4Q9WU22 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ptpn4Q9WU22 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ptpn4Q9WU22 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ptpn4Q9WU22 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ptpn4Q9WU22 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.81■□□□□ 0.76
Ptpn4Q9WU22 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ptpn4Q9WU22 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ptpn4Q9WU22 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ptpn4Q9WU22 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ptpn4Q9WU22 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ptpn4Q9WU22 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ptpn4Q9WU22 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ptpn4Q9WU22 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ptpn4Q9WU22 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ptpn4Q9WU22 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ptpn4Q9WU22 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.8■□□□□ 0.76
Ptpn4Q9WU22 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptpn4Q9WU22 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptpn4Q9WU22 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ptpn4Q9WU22 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ptpn4Q9WU22 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ptpn4Q9WU22 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptpn4Q9WU22 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ptpn4Q9WU22 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptpn4Q9WU22 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptpn4Q9WU22 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptpn4Q9WU22 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.79■□□□□ 0.76
Ptpn4Q9WU22 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.79■□□□□ 0.76
Ptpn4Q9WU22 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptpn4Q9WU22 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptpn4Q9WU22 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Ptpn4Q9WU22 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ptpn4Q9WU22 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Ptpn4Q9WU22 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptpn4Q9WU22 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptpn4Q9WU22 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptpn4Q9WU22 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ptpn4Q9WU22 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ptpn4Q9WU22 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ptpn4Q9WU22 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptpn4Q9WU22 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptpn4Q9WU22 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptpn4Q9WU22 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ptpn4Q9WU22 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ptpn4Q9WU22 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ptpn4Q9WU22 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ptpn4Q9WU22 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ptpn4Q9WU22 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ptpn4Q9WU22 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ptpn4Q9WU22 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ptpn4Q9WU22 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Ptpn4Q9WU22 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Ptpn4Q9WU22 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
Ptpn4Q9WU22 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.76■□□□□ 0.75
Ptpn4Q9WU22 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ptpn4Q9WU22 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ptpn4Q9WU22 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms