Protein–RNA interactions for Protein: Q9JIA1

Lgi1, Leucine-rich glioma-inactivated protein 1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgi1Q9JIA1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lgi1Q9JIA1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lgi1Q9JIA1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Lgi1Q9JIA1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Lgi1Q9JIA1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lgi1Q9JIA1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lgi1Q9JIA1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lgi1Q9JIA1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lgi1Q9JIA1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lgi1Q9JIA1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.79■□□□□ 0.6
Lgi1Q9JIA1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lgi1Q9JIA1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Lgi1Q9JIA1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lgi1Q9JIA1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lgi1Q9JIA1 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lgi1Q9JIA1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lgi1Q9JIA1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lgi1Q9JIA1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lgi1Q9JIA1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.78■□□□□ 0.6
Lgi1Q9JIA1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Lgi1Q9JIA1 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.78■□□□□ 0.6
Lgi1Q9JIA1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Lgi1Q9JIA1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lgi1Q9JIA1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lgi1Q9JIA1 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lgi1Q9JIA1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lgi1Q9JIA1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.77■□□□□ 0.6
Lgi1Q9JIA1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lgi1Q9JIA1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lgi1Q9JIA1 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lgi1Q9JIA1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lgi1Q9JIA1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lgi1Q9JIA1 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Lgi1Q9JIA1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lgi1Q9JIA1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lgi1Q9JIA1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lgi1Q9JIA1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Lgi1Q9JIA1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lgi1Q9JIA1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.76■□□□□ 0.59
Lgi1Q9JIA1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lgi1Q9JIA1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
Lgi1Q9JIA1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.76■□□□□ 0.59
Lgi1Q9JIA1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.76■□□□□ 0.59
Lgi1Q9JIA1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lgi1Q9JIA1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lgi1Q9JIA1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lgi1Q9JIA1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lgi1Q9JIA1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lgi1Q9JIA1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lgi1Q9JIA1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lgi1Q9JIA1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lgi1Q9JIA1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lgi1Q9JIA1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Lgi1Q9JIA1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lgi1Q9JIA1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lgi1Q9JIA1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lgi1Q9JIA1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Lgi1Q9JIA1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lgi1Q9JIA1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lgi1Q9JIA1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lgi1Q9JIA1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.74■□□□□ 0.59
Lgi1Q9JIA1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.74■□□□□ 0.59
Lgi1Q9JIA1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Lgi1Q9JIA1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Lgi1Q9JIA1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lgi1Q9JIA1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lgi1Q9JIA1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lgi1Q9JIA1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lgi1Q9JIA1 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.73■□□□□ 0.59
Lgi1Q9JIA1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lgi1Q9JIA1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Lgi1Q9JIA1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lgi1Q9JIA1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lgi1Q9JIA1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lgi1Q9JIA1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.73■□□□□ 0.59
Lgi1Q9JIA1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lgi1Q9JIA1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Lgi1Q9JIA1 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lgi1Q9JIA1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lgi1Q9JIA1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lgi1Q9JIA1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lgi1Q9JIA1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lgi1Q9JIA1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lgi1Q9JIA1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lgi1Q9JIA1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lgi1Q9JIA1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lgi1Q9JIA1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lgi1Q9JIA1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lgi1Q9JIA1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.72■□□□□ 0.59
Lgi1Q9JIA1 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Lgi1Q9JIA1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
Lgi1Q9JIA1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lgi1Q9JIA1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lgi1Q9JIA1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lgi1Q9JIA1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lgi1Q9JIA1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.72■□□□□ 0.59
Lgi1Q9JIA1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lgi1Q9JIA1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lgi1Q9JIA1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lgi1Q9JIA1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms