Protein–RNA interactions for Protein: Q92729

PTPRU, Receptor-type tyrosine-protein phosphatase U, humanhuman

Predictions only

Length 1,446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRUQ92729 LSR-205ENST00000427250 1606 ntTSL 2 BASIC32.06■■■□□ 2.72
PTPRUQ92729 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
PTPRUQ92729 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC32.06■■■□□ 2.72
PTPRUQ92729 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
PTPRUQ92729 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC32.06■■■□□ 2.72
PTPRUQ92729 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
PTPRUQ92729 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC32.05■■■□□ 2.72
PTPRUQ92729 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PTPRUQ92729 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC32.05■■■□□ 2.72
PTPRUQ92729 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
PTPRUQ92729 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC32.05■■■□□ 2.72
PTPRUQ92729 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC32.04■■■□□ 2.72
PTPRUQ92729 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC32.04■■■□□ 2.72
PTPRUQ92729 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC32.04■■■□□ 2.72
PTPRUQ92729 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC32.04■■■□□ 2.72
PTPRUQ92729 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
PTPRUQ92729 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
PTPRUQ92729 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC32.04■■■□□ 2.72
PTPRUQ92729 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC32.04■■■□□ 2.72
PTPRUQ92729 KRT18P14-201ENST00000534205 1250 ntBASIC32.04■■■□□ 2.72
PTPRUQ92729 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
PTPRUQ92729 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC32.04■■■□□ 2.72
PTPRUQ92729 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC32.03■■■□□ 2.72
PTPRUQ92729 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC32.03■■■□□ 2.72
PTPRUQ92729 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC32.03■■■□□ 2.72
PTPRUQ92729 KRT18P61-201ENST00000585825 1298 ntBASIC32.03■■■□□ 2.72
PTPRUQ92729 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC32.03■■■□□ 2.72
PTPRUQ92729 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
PTPRUQ92729 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
PTPRUQ92729 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC32.02■■■□□ 2.72
PTPRUQ92729 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC32.02■■■□□ 2.72
PTPRUQ92729 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC32.02■■■□□ 2.72
PTPRUQ92729 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
PTPRUQ92729 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
PTPRUQ92729 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC32.02■■■□□ 2.72
PTPRUQ92729 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC32.01■■■□□ 2.72
PTPRUQ92729 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC32.01■■■□□ 2.72
PTPRUQ92729 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC32.01■■■□□ 2.72
PTPRUQ92729 AL354811.1-201ENST00000610286 706 ntBASIC32.01■■■□□ 2.72
PTPRUQ92729 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC32.01■■■□□ 2.72
PTPRUQ92729 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC32■■■□□ 2.71
PTPRUQ92729 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC32■■■□□ 2.71
PTPRUQ92729 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC32■■■□□ 2.71
PTPRUQ92729 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC32■■■□□ 2.71
PTPRUQ92729 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC32■■■□□ 2.71
PTPRUQ92729 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
PTPRUQ92729 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC32■■■□□ 2.71
PTPRUQ92729 HLA-L-209ENST00000420110 1011 ntBASIC32■■■□□ 2.71
PTPRUQ92729 NTF6G-201ENST00000591094 616 ntBASIC32■■■□□ 2.71
PTPRUQ92729 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC32■■■□□ 2.71
PTPRUQ92729 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC31.99■■■□□ 2.71
PTPRUQ92729 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
PTPRUQ92729 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC31.99■■■□□ 2.71
PTPRUQ92729 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
PTPRUQ92729 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC31.99■■■□□ 2.71
PTPRUQ92729 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC31.99■■■□□ 2.71
PTPRUQ92729 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
PTPRUQ92729 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC31.99■■■□□ 2.71
PTPRUQ92729 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
PTPRUQ92729 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC31.98■■■□□ 2.71
PTPRUQ92729 AC141586.4-201ENST00000624558 1573 ntBASIC31.98■■■□□ 2.71
PTPRUQ92729 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC31.98■■■□□ 2.71
PTPRUQ92729 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
PTPRUQ92729 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
PTPRUQ92729 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
PTPRUQ92729 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
PTPRUQ92729 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC31.97■■■□□ 2.71
PTPRUQ92729 AC010525.1-201ENST00000585559 441 ntBASIC31.97■■■□□ 2.71
PTPRUQ92729 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
PTPRUQ92729 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
PTPRUQ92729 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PTPRUQ92729 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
PTPRUQ92729 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC31.96■■■□□ 2.71
PTPRUQ92729 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC31.96■■■□□ 2.71
PTPRUQ92729 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC31.95■■■□□ 2.71
PTPRUQ92729 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC31.95■■■□□ 2.71
PTPRUQ92729 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
PTPRUQ92729 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.71
PTPRUQ92729 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.7
PTPRUQ92729 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
PTPRUQ92729 GXYLT1P2-201ENST00000433312 1230 ntBASIC31.94■■■□□ 2.7
PTPRUQ92729 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC31.94■■■□□ 2.7
PTPRUQ92729 RAP2CP1-201ENST00000605103 478 ntBASIC31.93■■■□□ 2.7
PTPRUQ92729 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC31.93■■■□□ 2.7
PTPRUQ92729 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
PTPRUQ92729 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC31.92■■■□□ 2.7
PTPRUQ92729 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PTPRUQ92729 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC31.92■■■□□ 2.7
PTPRUQ92729 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC31.92■■■□□ 2.7
PTPRUQ92729 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PTPRUQ92729 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC31.91■■■□□ 2.7
PTPRUQ92729 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
PTPRUQ92729 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
PTPRUQ92729 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC31.91■■■□□ 2.7
PTPRUQ92729 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PTPRUQ92729 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PTPRUQ92729 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC31.9■■■□□ 2.7
PTPRUQ92729 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
PTPRUQ92729 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC31.9■■■□□ 2.7
PTPRUQ92729 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms