Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.16■■□□□ 1.46
DDX1Q92499 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX1Q92499 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX1Q92499 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
DDX1Q92499 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.16■■□□□ 1.46
DDX1Q92499 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
DDX1Q92499 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
DDX1Q92499 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
DDX1Q92499 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
DDX1Q92499 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.15■■□□□ 1.46
DDX1Q92499 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
DDX1Q92499 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
DDX1Q92499 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.14■■□□□ 1.45
DDX1Q92499 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.14■■□□□ 1.45
DDX1Q92499 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
DDX1Q92499 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
DDX1Q92499 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
DDX1Q92499 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
DDX1Q92499 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
DDX1Q92499 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
DDX1Q92499 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.14■■□□□ 1.45
DDX1Q92499 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.13■■□□□ 1.45
DDX1Q92499 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
DDX1Q92499 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
DDX1Q92499 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.13■■□□□ 1.45
DDX1Q92499 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.13■■□□□ 1.45
DDX1Q92499 BX664725.1-201ENST00000438252 379 ntBASIC24.13■■□□□ 1.45
DDX1Q92499 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.13■■□□□ 1.45
DDX1Q92499 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.13■■□□□ 1.45
DDX1Q92499 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX1Q92499 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.12■■□□□ 1.45
DDX1Q92499 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
DDX1Q92499 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX1Q92499 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.12■■□□□ 1.45
DDX1Q92499 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.12■■□□□ 1.45
DDX1Q92499 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.12■■□□□ 1.45
DDX1Q92499 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.12■■□□□ 1.45
DDX1Q92499 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX1Q92499 AC068473.5-201ENST00000616428 2072 ntBASIC24.12■■□□□ 1.45
DDX1Q92499 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
DDX1Q92499 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.11■■□□□ 1.45
DDX1Q92499 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
DDX1Q92499 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
DDX1Q92499 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC24.11■■□□□ 1.45
DDX1Q92499 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX1Q92499 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX1Q92499 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.11■■□□□ 1.45
DDX1Q92499 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
DDX1Q92499 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX1Q92499 C9orf163-202ENST00000624034 2573 ntBASIC24.11■■□□□ 1.45
DDX1Q92499 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.11■■□□□ 1.45
DDX1Q92499 DUSP8P3-201ENST00000399571 1760 ntBASIC24.11■■□□□ 1.45
DDX1Q92499 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX1Q92499 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX1Q92499 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
DDX1Q92499 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
DDX1Q92499 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.1■■□□□ 1.45
DDX1Q92499 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX1Q92499 KRT16P3-201ENST00000439127 1283 ntBASIC24.1■■□□□ 1.45
DDX1Q92499 MIR4787-201ENST00000607364 84 ntBASIC24.1■■□□□ 1.45
DDX1Q92499 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.1■■□□□ 1.45
DDX1Q92499 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
DDX1Q92499 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
DDX1Q92499 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX1Q92499 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
DDX1Q92499 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
DDX1Q92499 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.09■■□□□ 1.45
DDX1Q92499 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.09■■□□□ 1.45
DDX1Q92499 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.09■■□□□ 1.45
DDX1Q92499 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.09■■□□□ 1.45
DDX1Q92499 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.09■■□□□ 1.45
DDX1Q92499 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
DDX1Q92499 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
DDX1Q92499 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.09■■□□□ 1.45
DDX1Q92499 MIR6722-201ENST00000617286 78 ntBASIC24.09■■□□□ 1.45
DDX1Q92499 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.09■■□□□ 1.45
DDX1Q92499 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.09■■□□□ 1.45
DDX1Q92499 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
DDX1Q92499 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.09■■□□□ 1.45
DDX1Q92499 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.08■■□□□ 1.45
DDX1Q92499 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX1Q92499 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
DDX1Q92499 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
DDX1Q92499 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
DDX1Q92499 AC133561.1-201ENST00000568600 2415 ntBASIC24.08■■□□□ 1.45
DDX1Q92499 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.08■■□□□ 1.45
DDX1Q92499 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC24.08■■□□□ 1.45
DDX1Q92499 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.08■■□□□ 1.45
DDX1Q92499 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.08■■□□□ 1.45
DDX1Q92499 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.08■■□□□ 1.45
DDX1Q92499 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
DDX1Q92499 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX1Q92499 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX1Q92499 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
DDX1Q92499 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX1Q92499 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
DDX1Q92499 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
DDX1Q92499 AC092028.1-203ENST00000608262 953 ntBASIC24.07■■□□□ 1.44
DDX1Q92499 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
DDX1Q92499 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms