Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Clcn4Q61418 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn4Q61418 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn4Q61418 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn4Q61418 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn4Q61418 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn4Q61418 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn4Q61418 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn4Q61418 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn4Q61418 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Clcn4Q61418 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn4Q61418 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn4Q61418 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Clcn4Q61418 Gm7417-201ENSMUST00000192950 473 ntBASIC18.5■□□□□ 0.55
Clcn4Q61418 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.5■□□□□ 0.55
Clcn4Q61418 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.5■□□□□ 0.55
Clcn4Q61418 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn4Q61418 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn4Q61418 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn4Q61418 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clcn4Q61418 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn4Q61418 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn4Q61418 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Clcn4Q61418 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn4Q61418 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn4Q61418 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.49■□□□□ 0.55
Clcn4Q61418 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.49■□□□□ 0.55
Clcn4Q61418 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn4Q61418 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn4Q61418 Iqck-206ENSMUST00000208658 2891 ntBASIC18.49■□□□□ 0.55
Clcn4Q61418 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn4Q61418 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn4Q61418 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn4Q61418 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn4Q61418 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Clcn4Q61418 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Clcn4Q61418 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn4Q61418 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn4Q61418 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn4Q61418 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.48■□□□□ 0.55
Clcn4Q61418 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn4Q61418 Gm10399-202ENSMUST00000202768 748 ntBASIC18.48■□□□□ 0.55
Clcn4Q61418 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn4Q61418 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn4Q61418 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.48■□□□□ 0.55
Clcn4Q61418 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn4Q61418 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn4Q61418 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn4Q61418 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clcn4Q61418 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Clcn4Q61418 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Clcn4Q61418 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Clcn4Q61418 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clcn4Q61418 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clcn4Q61418 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.47■□□□□ 0.55
Clcn4Q61418 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.47■□□□□ 0.55
Clcn4Q61418 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clcn4Q61418 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clcn4Q61418 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clcn4Q61418 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clcn4Q61418 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.46■□□□□ 0.55
Clcn4Q61418 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcn4Q61418 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcn4Q61418 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcn4Q61418 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.46■□□□□ 0.55
Clcn4Q61418 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Clcn4Q61418 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcn4Q61418 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Clcn4Q61418 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcn4Q61418 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clcn4Q61418 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
Clcn4Q61418 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn4Q61418 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn4Q61418 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Clcn4Q61418 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn4Q61418 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn4Q61418 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Clcn4Q61418 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn4Q61418 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Clcn4Q61418 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clcn4Q61418 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn4Q61418 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn4Q61418 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn4Q61418 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn4Q61418 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Clcn4Q61418 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.44■□□□□ 0.54
Clcn4Q61418 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn4Q61418 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.44■□□□□ 0.54
Clcn4Q61418 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn4Q61418 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn4Q61418 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn4Q61418 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clcn4Q61418 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn4Q61418 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn4Q61418 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn4Q61418 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn4Q61418 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.43■□□□□ 0.54
Clcn4Q61418 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clcn4Q61418 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Clcn4Q61418 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms