Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ripk1Q60855 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ripk1Q60855 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ripk1Q60855 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ripk1Q60855 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ripk1Q60855 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ripk1Q60855 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Ripk1Q60855 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ripk1Q60855 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ripk1Q60855 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ripk1Q60855 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
Ripk1Q60855 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Ripk1Q60855 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ripk1Q60855 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ripk1Q60855 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ripk1Q60855 Gm7417-201ENSMUST00000192950 473 ntBASIC19.01■□□□□ 0.63
Ripk1Q60855 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ripk1Q60855 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ripk1Q60855 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ripk1Q60855 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ripk1Q60855 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ripk1Q60855 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ripk1Q60855 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19■□□□□ 0.63
Ripk1Q60855 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ripk1Q60855 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ripk1Q60855 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19■□□□□ 0.63
Ripk1Q60855 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ripk1Q60855 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ripk1Q60855 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ripk1Q60855 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ripk1Q60855 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ripk1Q60855 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ripk1Q60855 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ripk1Q60855 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ripk1Q60855 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Ripk1Q60855 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ripk1Q60855 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ripk1Q60855 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ripk1Q60855 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Ripk1Q60855 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ripk1Q60855 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.99■□□□□ 0.63
Ripk1Q60855 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.99■□□□□ 0.63
Ripk1Q60855 Gm7143-201ENSMUST00000222811 859 ntBASIC18.99■□□□□ 0.63
Ripk1Q60855 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ripk1Q60855 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ripk1Q60855 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ripk1Q60855 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ripk1Q60855 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ripk1Q60855 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ripk1Q60855 Etf1-202ENSMUST00000180351 108 ntBASIC18.98■□□□□ 0.63
Ripk1Q60855 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.98■□□□□ 0.63
Ripk1Q60855 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ripk1Q60855 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Ripk1Q60855 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ripk1Q60855 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ripk1Q60855 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.98■□□□□ 0.63
Ripk1Q60855 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ripk1Q60855 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ripk1Q60855 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ripk1Q60855 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ripk1Q60855 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ripk1Q60855 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.97■□□□□ 0.63
Ripk1Q60855 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ripk1Q60855 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ripk1Q60855 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ripk1Q60855 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ripk1Q60855 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ripk1Q60855 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ripk1Q60855 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ripk1Q60855 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ripk1Q60855 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ripk1Q60855 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.96■□□□□ 0.63
Ripk1Q60855 Gm9959-201ENSMUST00000068277 390 ntBASIC18.96■□□□□ 0.63
Ripk1Q60855 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ripk1Q60855 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ripk1Q60855 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ripk1Q60855 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ripk1Q60855 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ripk1Q60855 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ripk1Q60855 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ripk1Q60855 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ripk1Q60855 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ripk1Q60855 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ripk1Q60855 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ripk1Q60855 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ripk1Q60855 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ripk1Q60855 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ripk1Q60855 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ripk1Q60855 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ripk1Q60855 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ripk1Q60855 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Ripk1Q60855 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ripk1Q60855 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.94■□□□□ 0.62
Ripk1Q60855 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ripk1Q60855 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ripk1Q60855 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ripk1Q60855 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ripk1Q60855 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ripk1Q60855 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ripk1Q60855 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms