Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC28.24■■■□□ 2.11
PDE6BP35913 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC28.24■■■□□ 2.11
PDE6BP35913 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC28.24■■■□□ 2.11
PDE6BP35913 MIR6084-201ENST00000622012 110 ntBASIC28.24■■■□□ 2.11
PDE6BP35913 CD37-213ENST00000598095 1598 ntTSL 2 BASIC28.24■■■□□ 2.11
PDE6BP35913 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PDE6BP35913 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
PDE6BP35913 GXYLT1P2-201ENST00000433312 1230 ntBASIC28.23■■■□□ 2.11
PDE6BP35913 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC28.22■■■□□ 2.11
PDE6BP35913 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC28.22■■■□□ 2.11
PDE6BP35913 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
PDE6BP35913 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC28.22■■■□□ 2.11
PDE6BP35913 CCDC92B-201ENST00000575506 885 ntBASIC28.22■■■□□ 2.11
PDE6BP35913 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PDE6BP35913 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PDE6BP35913 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC28.21■■■□□ 2.11
PDE6BP35913 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PDE6BP35913 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
PDE6BP35913 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PDE6BP35913 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PDE6BP35913 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
PDE6BP35913 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.11
PDE6BP35913 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
PDE6BP35913 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
PDE6BP35913 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC28.2■■■□□ 2.1
PDE6BP35913 VPS53-216ENST00000574029 585 ntTSL 4 BASIC28.2■■■□□ 2.1
PDE6BP35913 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
PDE6BP35913 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC28.19■■■□□ 2.1
PDE6BP35913 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PDE6BP35913 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PDE6BP35913 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
PDE6BP35913 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PDE6BP35913 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
PDE6BP35913 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC28.19■■■□□ 2.1
PDE6BP35913 NTF6G-201ENST00000591094 616 ntBASIC28.19■■■□□ 2.1
PDE6BP35913 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC28.19■■■□□ 2.1
PDE6BP35913 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PDE6BP35913 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PDE6BP35913 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PDE6BP35913 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
PDE6BP35913 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC28.18■■■□□ 2.1
PDE6BP35913 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC28.18■■■□□ 2.1
PDE6BP35913 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PDE6BP35913 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC28.18■■■□□ 2.1
PDE6BP35913 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
PDE6BP35913 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC28.17■■■□□ 2.1
PDE6BP35913 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC28.17■■■□□ 2.1
PDE6BP35913 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC28.17■■■□□ 2.1
PDE6BP35913 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
PDE6BP35913 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PDE6BP35913 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.16■■■□□ 2.1
PDE6BP35913 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
PDE6BP35913 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
PDE6BP35913 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PDE6BP35913 KRT18P14-201ENST00000534205 1250 ntBASIC28.16■■■□□ 2.1
PDE6BP35913 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
PDE6BP35913 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PDE6BP35913 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
PDE6BP35913 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
PDE6BP35913 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
PDE6BP35913 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PDE6BP35913 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PDE6BP35913 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC28.15■■■□□ 2.1
PDE6BP35913 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
PDE6BP35913 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
PDE6BP35913 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
PDE6BP35913 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
PDE6BP35913 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC28.14■■■□□ 2.1
PDE6BP35913 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC28.14■■■□□ 2.1
PDE6BP35913 TERF1P2-201ENST00000583350 1212 ntBASIC28.14■■■□□ 2.1
PDE6BP35913 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC28.14■■■□□ 2.1
PDE6BP35913 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PDE6BP35913 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PDE6BP35913 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
PDE6BP35913 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PDE6BP35913 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
PDE6BP35913 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC28.13■■■□□ 2.09
PDE6BP35913 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.13■■■□□ 2.09
PDE6BP35913 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
PDE6BP35913 LINC02228-203ENST00000641970 1355 ntBASIC28.12■■■□□ 2.09
PDE6BP35913 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
PDE6BP35913 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PDE6BP35913 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC28.12■■■□□ 2.09
PDE6BP35913 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
PDE6BP35913 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PDE6BP35913 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PDE6BP35913 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PDE6BP35913 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
PDE6BP35913 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
PDE6BP35913 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
PDE6BP35913 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC28.11■■■□□ 2.09
PDE6BP35913 ALDH1A3-203ENST00000557963 1670 ntBASIC28.11■■■□□ 2.09
PDE6BP35913 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC28.11■■■□□ 2.09
PDE6BP35913 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC28.11■■■□□ 2.09
PDE6BP35913 AC133637.1-201ENST00000624115 1537 ntBASIC28.11■■■□□ 2.09
PDE6BP35913 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PDE6BP35913 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PDE6BP35913 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PDE6BP35913 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
PDE6BP35913 CEBPA-AS1-201ENST00000592982 2198 ntBASIC28.1■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms