Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC39.48■■■■□ 3.91
CFTRP13569 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC39.48■■■■□ 3.91
CFTRP13569 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC39.48■■■■□ 3.91
CFTRP13569 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC39.48■■■■□ 3.91
CFTRP13569 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC39.47■■■■□ 3.91
CFTRP13569 AC141586.4-201ENST00000624558 1573 ntBASIC39.47■■■■□ 3.91
CFTRP13569 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC39.47■■■■□ 3.91
CFTRP13569 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
CFTRP13569 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC39.47■■■■□ 3.91
CFTRP13569 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC39.47■■■■□ 3.91
CFTRP13569 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC39.47■■■■□ 3.91
CFTRP13569 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC39.47■■■■□ 3.91
CFTRP13569 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC39.47■■■■□ 3.91
CFTRP13569 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC39.46■■■■□ 3.91
CFTRP13569 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC39.46■■■■□ 3.91
CFTRP13569 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC39.46■■■■□ 3.91
CFTRP13569 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC39.46■■■■□ 3.91
CFTRP13569 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC39.45■■■■□ 3.91
CFTRP13569 LINC02228-203ENST00000641970 1355 ntBASIC39.45■■■■□ 3.91
CFTRP13569 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC39.45■■■■□ 3.91
CFTRP13569 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC39.45■■■■□ 3.91
CFTRP13569 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC39.45■■■■□ 3.91
CFTRP13569 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC39.45■■■■□ 3.91
CFTRP13569 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC39.44■■■■□ 3.9
CFTRP13569 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC39.44■■■■□ 3.9
CFTRP13569 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC39.44■■■■□ 3.9
CFTRP13569 TK2-208ENST00000545043 1120 ntTSL 2 BASIC39.43■■■■□ 3.9
CFTRP13569 EMC9-206ENST00000560403 872 ntTSL 2 BASIC39.43■■■■□ 3.9
CFTRP13569 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC39.43■■■■□ 3.9
CFTRP13569 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
CFTRP13569 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC39.43■■■■□ 3.9
CFTRP13569 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC39.43■■■■□ 3.9
CFTRP13569 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
CFTRP13569 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC39.43■■■■□ 3.9
CFTRP13569 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC39.42■■■■□ 3.9
CFTRP13569 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC39.42■■■■□ 3.9
CFTRP13569 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC39.42■■■■□ 3.9
CFTRP13569 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC39.42■■■■□ 3.9
CFTRP13569 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC39.42■■■■□ 3.9
CFTRP13569 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC39.42■■■■□ 3.9
CFTRP13569 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC39.42■■■■□ 3.9
CFTRP13569 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC39.41■■■■□ 3.9
CFTRP13569 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC39.41■■■■□ 3.9
CFTRP13569 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC39.41■■■■□ 3.9
CFTRP13569 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC39.41■■■■□ 3.9
CFTRP13569 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC39.41■■■■□ 3.9
CFTRP13569 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC39.4■■■■□ 3.9
CFTRP13569 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC39.4■■■■□ 3.9
CFTRP13569 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC39.4■■■■□ 3.9
CFTRP13569 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC39.4■■■■□ 3.9
CFTRP13569 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC39.39■■■■□ 3.9
CFTRP13569 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC39.39■■■■□ 3.9
CFTRP13569 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC39.39■■■■□ 3.9
CFTRP13569 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC39.39■■■■□ 3.9
CFTRP13569 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC39.39■■■■□ 3.9
CFTRP13569 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC39.39■■■■□ 3.9
CFTRP13569 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC39.38■■■■□ 3.9
CFTRP13569 OR2I1P-207ENST00000453522 948 ntBASIC39.38■■■■□ 3.9
CFTRP13569 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC39.38■■■■□ 3.9
CFTRP13569 AL161729.1-201ENST00000604104 1402 ntBASIC39.38■■■■□ 3.9
CFTRP13569 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC39.38■■■■□ 3.9
CFTRP13569 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC39.38■■■■□ 3.89
CFTRP13569 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
CFTRP13569 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
CFTRP13569 ABHD17AP1-201ENST00000358206 933 ntBASIC39.37■■■■□ 3.89
CFTRP13569 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC39.37■■■■□ 3.89
CFTRP13569 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC39.37■■■■□ 3.89
CFTRP13569 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC39.37■■■■□ 3.89
CFTRP13569 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC39.37■■■■□ 3.89
CFTRP13569 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC39.37■■■■□ 3.89
CFTRP13569 PKM-203ENST00000389093 2279 ntTSL 5 BASIC39.37■■■■□ 3.89
CFTRP13569 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC39.37■■■■□ 3.89
CFTRP13569 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC39.37■■■■□ 3.89
CFTRP13569 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC39.37■■■■□ 3.89
CFTRP13569 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC39.36■■■■□ 3.89
CFTRP13569 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC39.36■■■■□ 3.89
CFTRP13569 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC39.36■■■■□ 3.89
CFTRP13569 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC39.36■■■■□ 3.89
CFTRP13569 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC39.35■■■■□ 3.89
CFTRP13569 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC39.35■■■■□ 3.89
CFTRP13569 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC39.35■■■■□ 3.89
CFTRP13569 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC39.35■■■■□ 3.89
CFTRP13569 AC010525.1-201ENST00000585559 441 ntBASIC39.35■■■■□ 3.89
CFTRP13569 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC39.35■■■■□ 3.89
CFTRP13569 AC073111.5-205ENST00000641717 521 ntBASIC39.35■■■■□ 3.89
CFTRP13569 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC39.35■■■■□ 3.89
CFTRP13569 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC39.35■■■■□ 3.89
CFTRP13569 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC39.35■■■■□ 3.89
CFTRP13569 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC39.34■■■■□ 3.89
CFTRP13569 LSR-205ENST00000427250 1606 ntTSL 2 BASIC39.34■■■■□ 3.89
CFTRP13569 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC39.34■■■■□ 3.89
CFTRP13569 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC39.34■■■■□ 3.89
CFTRP13569 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC39.34■■■■□ 3.89
CFTRP13569 CDCA4P2-201ENST00000441182 718 ntBASIC39.34■■■■□ 3.89
CFTRP13569 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC39.34■■■■□ 3.89
CFTRP13569 AC080038.1-201ENST00000611274 1154 ntBASIC39.34■■■■□ 3.89
CFTRP13569 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC39.34■■■■□ 3.89
CFTRP13569 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC39.33■■■■□ 3.89
CFTRP13569 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC39.33■■■■□ 3.89
CFTRP13569 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC39.33■■■■□ 3.89
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms