Protein–RNA interactions for Protein: A0A140T8M3

Igkv8-30, Immunoglobulin kappa chain variable 8-30 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-30A0A140T8M3 Shroom3-211ENSMUST00000225438 5742 ntBASIC12.83□□□□□ -0.35
Igkv8-30A0A140T8M3 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Igkv8-30A0A140T8M3 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Igkv8-30A0A140T8M3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Igkv8-30A0A140T8M3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Dapk1-207ENSMUST00000226059 5009 ntBASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 AC153911.1-201ENSMUST00000220378 758 ntBASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv8-30A0A140T8M3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-30A0A140T8M3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Igkv8-30A0A140T8M3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-30A0A140T8M3 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-30A0A140T8M3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-30A0A140T8M3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-30A0A140T8M3 Gm6821-201ENSMUST00000107540 542 ntBASIC12.82□□□□□ -0.36
Igkv8-30A0A140T8M3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC12.82□□□□□ -0.36
Igkv8-30A0A140T8M3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-30A0A140T8M3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv8-30A0A140T8M3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Igkv8-30A0A140T8M3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-30A0A140T8M3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-30A0A140T8M3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-30A0A140T8M3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-30A0A140T8M3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC12.81□□□□□ -0.36
Igkv8-30A0A140T8M3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-30A0A140T8M3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-30A0A140T8M3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-30A0A140T8M3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-30A0A140T8M3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-30A0A140T8M3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Igkv8-30A0A140T8M3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-30A0A140T8M3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-30A0A140T8M3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv8-30A0A140T8M3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-30A0A140T8M3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-30A0A140T8M3 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-30A0A140T8M3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Igkv8-30A0A140T8M3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-30A0A140T8M3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-30A0A140T8M3 Gm9939-201ENSMUST00000067161 1154 ntBASIC12.8□□□□□ -0.36
Igkv8-30A0A140T8M3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-30A0A140T8M3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-30A0A140T8M3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-30A0A140T8M3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-30A0A140T8M3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-30A0A140T8M3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-30A0A140T8M3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-30A0A140T8M3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv8-30A0A140T8M3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv8-30A0A140T8M3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv8-30A0A140T8M3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv8-30A0A140T8M3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Igkv8-30A0A140T8M3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC12.79□□□□□ -0.36
Igkv8-30A0A140T8M3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC12.79□□□□□ -0.36
Igkv8-30A0A140T8M3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Igkv8-30A0A140T8M3 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Igkv8-30A0A140T8M3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Igkv8-30A0A140T8M3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv8-30A0A140T8M3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Igkv8-30A0A140T8M3 Gm13889-201ENSMUST00000099689 1386 ntBASIC12.79□□□□□ -0.36
Igkv8-30A0A140T8M3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Igkv8-30A0A140T8M3 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv8-30A0A140T8M3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Igkv8-30A0A140T8M3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv8-30A0A140T8M3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Igkv8-30A0A140T8M3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv8-30A0A140T8M3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv8-30A0A140T8M3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv8-30A0A140T8M3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv8-30A0A140T8M3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC12.78□□□□□ -0.36
Igkv8-30A0A140T8M3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv8-30A0A140T8M3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC12.78□□□□□ -0.36
Igkv8-30A0A140T8M3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv8-30A0A140T8M3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv8-30A0A140T8M3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Igkv8-30A0A140T8M3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms