Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9-1A0A075B601 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9-1A0A075B601 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.78■□□□□ 0.12
Trav9-1A0A075B601 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9-1A0A075B601 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9-1A0A075B601 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9-1A0A075B601 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav9-1A0A075B601 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9-1A0A075B601 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trav9-1A0A075B601 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9-1A0A075B601 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9-1A0A075B601 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav9-1A0A075B601 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav9-1A0A075B601 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9-1A0A075B601 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav9-1A0A075B601 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav9-1A0A075B601 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.77■□□□□ 0.11
Trav9-1A0A075B601 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav9-1A0A075B601 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav9-1A0A075B601 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav9-1A0A075B601 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.77■□□□□ 0.11
Trav9-1A0A075B601 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav9-1A0A075B601 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav9-1A0A075B601 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trav9-1A0A075B601 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9-1A0A075B601 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9-1A0A075B601 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9-1A0A075B601 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9-1A0A075B601 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Trav9-1A0A075B601 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9-1A0A075B601 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9-1A0A075B601 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.76■□□□□ 0.11
Trav9-1A0A075B601 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9-1A0A075B601 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9-1A0A075B601 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9-1A0A075B601 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9-1A0A075B601 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9-1A0A075B601 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav9-1A0A075B601 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9-1A0A075B601 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trav9-1A0A075B601 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav9-1A0A075B601 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.75■□□□□ 0.11
Trav9-1A0A075B601 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9-1A0A075B601 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9-1A0A075B601 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav9-1A0A075B601 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9-1A0A075B601 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9-1A0A075B601 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9-1A0A075B601 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9-1A0A075B601 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav9-1A0A075B601 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.74■□□□□ 0.11
Trav9-1A0A075B601 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9-1A0A075B601 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9-1A0A075B601 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.74■□□□□ 0.11
Trav9-1A0A075B601 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9-1A0A075B601 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav9-1A0A075B601 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trav9-1A0A075B601 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9-1A0A075B601 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9-1A0A075B601 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trav9-1A0A075B601 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.73■□□□□ 0.11
Trav9-1A0A075B601 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.73■□□□□ 0.11
Trav9-1A0A075B601 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9-1A0A075B601 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9-1A0A075B601 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9-1A0A075B601 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9-1A0A075B601 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.72■□□□□ 0.11
Trav9-1A0A075B601 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.72■□□□□ 0.11
Trav9-1A0A075B601 Gm10232-201ENSMUST00000089221 720 ntBASIC15.72■□□□□ 0.11
Trav9-1A0A075B601 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav9-1A0A075B601 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9-1A0A075B601 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9-1A0A075B601 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9-1A0A075B601 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9-1A0A075B601 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9-1A0A075B601 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9-1A0A075B601 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9-1A0A075B601 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC15.71■□□□□ 0.11
Trav9-1A0A075B601 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.71■□□□□ 0.11
Trav9-1A0A075B601 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9-1A0A075B601 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav9-1A0A075B601 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trav9-1A0A075B601 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav9-1A0A075B601 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9-1A0A075B601 Gm10399-202ENSMUST00000202768 748 ntBASIC15.71■□□□□ 0.11
Trav9-1A0A075B601 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9-1A0A075B601 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9-1A0A075B601 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9-1A0A075B601 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9-1A0A075B601 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav9-1A0A075B601 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trav9-1A0A075B601 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav9-1A0A075B601 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9-1A0A075B601 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9-1A0A075B601 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9-1A0A075B601 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav9-1A0A075B601 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav9-1A0A075B601 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9-1A0A075B601 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9-1A0A075B601 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms