Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC10.05□□□□□ -0.8
UBE2D4Q9Y2X8 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 Z82170.1-201ENST00000625081 3192 ntBASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 AL359845.1-201ENST00000458202 1648 ntBASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 AC009093.2-202ENST00000620513 2079 ntBASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 GALT-202ENST00000450095 1280 ntTSL 2 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 TMPRSS11CP-201ENST00000453277 683 ntBASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 AC011495.1-201ENST00000498085 584 ntBASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 TMEM261P1-201ENST00000604899 340 ntBASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
UBE2D4Q9Y2X8 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms