Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga6Q91XY2 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Gm13445-201ENSMUST00000121664 307 ntBASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Gm11942-201ENSMUST00000180255 345 ntBASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga6Q91XY2 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdhga6Q91XY2 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdhga6Q91XY2 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.27□□□□□ -0.6
Pcdhga6Q91XY2 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdhga6Q91XY2 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdhga6Q91XY2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdhga6Q91XY2 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Pcdhga6Q91XY2 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Gm11619-201ENSMUST00000117474 237 ntBASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Gm9673-201ENSMUST00000119287 781 ntBASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Gm25677-201ENSMUST00000174983 72 ntBASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Gm7741-201ENSMUST00000181445 989 ntBASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Gm9081-201ENSMUST00000182346 991 ntBASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Gm43380-201ENSMUST00000200421 220 ntBASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Gm6450-201ENSMUST00000200896 574 ntBASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 BC049987-201ENSMUST00000213859 918 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Gm7940-201ENSMUST00000218195 769 ntBASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Pcdhga6Q91XY2 Gm10263-201ENSMUST00000085163 300 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms