Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 AC138701.2-201ENST00000553634 226 ntBASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 ODCP-201ENST00000459650 1639 ntBASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
NPC1L1Q9UHC9 AC072061.1-201ENST00000569710 2234 ntBASIC19.02■□□□□ 0.63
NPC1L1Q9UHC9 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPC1L1Q9UHC9 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
NPC1L1Q9UHC9 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPC1L1Q9UHC9 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.63
NPC1L1Q9UHC9 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPC1L1Q9UHC9 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
NPC1L1Q9UHC9 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NPC1L1Q9UHC9 OS9-207ENST00000439210 1946 ntTSL 2 BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 RN7SL767P-201ENST00000493013 295 ntBASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 CFL1-214ENST00000534769 758 ntTSL 2 BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 MT3-203ENST00000565838 421 ntTSL 3 BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 AC242376.2-201ENST00000619355 883 ntBASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 AC111170.3-201ENST00000624282 2464 ntBASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 NRADDP-202ENST00000641269 1585 ntBASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 NCLP1-201ENST00000445357 1963 ntBASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NPC1L1Q9UHC9 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC19■□□□□ 0.63
NPC1L1Q9UHC9 AC005722.1-201ENST00000431878 964 ntBASIC19■□□□□ 0.63
NPC1L1Q9UHC9 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 AC079328.1-201ENST00000560358 952 ntBASIC19■□□□□ 0.63
NPC1L1Q9UHC9 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 AC016629.1-201ENST00000596579 586 ntBASIC19■□□□□ 0.63
NPC1L1Q9UHC9 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NPC1L1Q9UHC9 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPC1L1Q9UHC9 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
NPC1L1Q9UHC9 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
NPC1L1Q9UHC9 PHB-210ENST00000511832 1509 ntTSL 2 BASIC18.99■□□□□ 0.63
NPC1L1Q9UHC9 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPC1L1Q9UHC9 TSPY26P-202ENST00000565928 3884 ntBASIC18.99■□□□□ 0.63
NPC1L1Q9UHC9 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
NPC1L1Q9UHC9 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
NPC1L1Q9UHC9 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPC1L1Q9UHC9 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC18.99■□□□□ 0.63
NPC1L1Q9UHC9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NPC1L1Q9UHC9 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC18.99■□□□□ 0.63
NPC1L1Q9UHC9 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms