Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 RN7SL752P-201ENST00000463779 287 ntBASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 GNRHR2-203ENST00000581100 1187 ntBASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 KRT18P8-201ENST00000581937 1246 ntBASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 RN7SL713P-201ENST00000582127 302 ntBASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 ECM1P1-201ENST00000604092 1279 ntBASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 AC006453.4-201ENST00000636949 1252 ntBASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 AC068760.1-201ENST00000493579 1953 ntBASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
THUMPD1Q9NXG2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 AC092933.1-201ENST00000393644 945 ntBASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 AC016694.1-201ENST00000434179 700 ntBASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 ZACNP1-201ENST00000612259 710 ntBASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.61□□□□□ -0.23
THUMPD1Q9NXG2 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms