Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.14□□□□□ -0.31
USB1Q9BQ65 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.14□□□□□ -0.31
USB1Q9BQ65 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 REXO1L5P-201ENST00000622260 2098 ntBASIC13.14□□□□□ -0.31
USB1Q9BQ65 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
USB1Q9BQ65 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC13.14□□□□□ -0.31
USB1Q9BQ65 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
USB1Q9BQ65 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.14□□□□□ -0.31
USB1Q9BQ65 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.14□□□□□ -0.31
USB1Q9BQ65 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC13.14□□□□□ -0.31
USB1Q9BQ65 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.14□□□□□ -0.31
USB1Q9BQ65 GOLGA2P4-201ENST00000441462 777 ntBASIC13.14□□□□□ -0.31
USB1Q9BQ65 AC004898.1-201ENST00000451057 766 ntBASIC13.14□□□□□ -0.31
USB1Q9BQ65 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.14□□□□□ -0.31
USB1Q9BQ65 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.14□□□□□ -0.31
USB1Q9BQ65 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 AP003041.2-201ENST00000525666 1180 ntBASIC13.14□□□□□ -0.31
USB1Q9BQ65 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.14□□□□□ -0.31
USB1Q9BQ65 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.14□□□□□ -0.31
USB1Q9BQ65 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.14□□□□□ -0.31
USB1Q9BQ65 PPY2P-201ENST00000582808 702 ntBASIC13.14□□□□□ -0.31
USB1Q9BQ65 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.14□□□□□ -0.31
USB1Q9BQ65 AL023803.2-201ENST00000620080 638 ntBASIC13.14□□□□□ -0.31
USB1Q9BQ65 AC097655.1-201ENST00000635075 318 ntBASIC13.14□□□□□ -0.31
USB1Q9BQ65 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
USB1Q9BQ65 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
USB1Q9BQ65 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.14□□□□□ -0.31
USB1Q9BQ65 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.14□□□□□ -0.31
USB1Q9BQ65 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
USB1Q9BQ65 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.14□□□□□ -0.31
USB1Q9BQ65 AC232323.1-201ENST00000540724 2099 ntBASIC13.14□□□□□ -0.31
USB1Q9BQ65 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.14□□□□□ -0.31
USB1Q9BQ65 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
USB1Q9BQ65 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 CLUHP2-201ENST00000426660 1303 ntBASIC13.13□□□□□ -0.31
USB1Q9BQ65 FKBP4P6-201ENST00000457486 1332 ntBASIC13.13□□□□□ -0.31
USB1Q9BQ65 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 LILRP1-201ENST00000444199 1370 ntBASIC13.13□□□□□ -0.31
USB1Q9BQ65 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms