Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp49Q6P9L4 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp49Q6P9L4 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp49Q6P9L4 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp49Q6P9L4 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Usp49Q6P9L4 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.59□□□□□ -0.39
Usp49Q6P9L4 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp49Q6P9L4 Gm9550-201ENSMUST00000161130 862 ntBASIC12.59□□□□□ -0.39
Usp49Q6P9L4 Gm7467-201ENSMUST00000185173 652 ntBASIC12.59□□□□□ -0.39
Usp49Q6P9L4 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.59□□□□□ -0.39
Usp49Q6P9L4 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC12.59□□□□□ -0.39
Usp49Q6P9L4 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC12.59□□□□□ -0.39
Usp49Q6P9L4 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Usp49Q6P9L4 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp49Q6P9L4 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp49Q6P9L4 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.59□□□□□ -0.39
Usp49Q6P9L4 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp49Q6P9L4 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Usp49Q6P9L4 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp49Q6P9L4 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.59□□□□□ -0.39
Usp49Q6P9L4 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp49Q6P9L4 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp49Q6P9L4 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.59□□□□□ -0.39
Usp49Q6P9L4 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Usp49Q6P9L4 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Usp49Q6P9L4 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.58□□□□□ -0.39
Usp49Q6P9L4 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.39
Usp49Q6P9L4 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Gm25076-201ENSMUST00000104098 132 ntBASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Gm15432-201ENSMUST00000121106 195 ntBASIC12.58□□□□□ -0.4
Usp49Q6P9L4 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Gm23045-201ENSMUST00000175041 96 ntBASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.58□□□□□ -0.4
Usp49Q6P9L4 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Gm5468-202ENSMUST00000227851 682 ntBASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.58□□□□□ -0.4
Usp49Q6P9L4 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Usp49Q6P9L4 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Gm21092-201ENSMUST00000178995 955 ntBASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Mir7051-201ENSMUST00000184167 73 ntBASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Gm37458-201ENSMUST00000194055 410 ntBASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Gm17831-201ENSMUST00000205579 900 ntBASIC12.57□□□□□ -0.4
Usp49Q6P9L4 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Gm5451-201ENSMUST00000080545 579 ntBASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Usp49Q6P9L4 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms