Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.25□□□□□ -0.29
CDC42P60953 MIR1233-2-201ENST00000408138 82 ntBASIC13.25□□□□□ -0.29
CDC42P60953 MIR1233-1-201ENST00000408722 82 ntBASIC13.25□□□□□ -0.29
CDC42P60953 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC42P60953 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC42P60953 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.25□□□□□ -0.29
CDC42P60953 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 SPDYE18-201ENST00000510091 1050 ntBASIC13.25□□□□□ -0.29
CDC42P60953 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.25□□□□□ -0.29
CDC42P60953 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.25□□□□□ -0.29
CDC42P60953 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC42P60953 AC027237.1-201ENST00000560942 655 ntBASIC13.25□□□□□ -0.29
CDC42P60953 AC025678.2-201ENST00000562061 970 ntBASIC13.25□□□□□ -0.29
CDC42P60953 AC005586.2-201ENST00000563946 837 ntBASIC13.25□□□□□ -0.29
CDC42P60953 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.25□□□□□ -0.29
CDC42P60953 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.25□□□□□ -0.29
CDC42P60953 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC42P60953 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 AC027612.4-201ENST00000605371 583 ntBASIC13.25□□□□□ -0.29
CDC42P60953 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC42P60953 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CDC42P60953 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.25□□□□□ -0.29
CDC42P60953 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC42P60953 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.25□□□□□ -0.29
CDC42P60953 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDC42P60953 MARK2P9-201ENST00000430958 1727 ntBASIC13.25□□□□□ -0.29
CDC42P60953 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42P60953 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42P60953 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.24□□□□□ -0.29
CDC42P60953 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
CDC42P60953 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42P60953 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC13.24□□□□□ -0.29
CDC42P60953 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42P60953 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.24□□□□□ -0.29
CDC42P60953 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42P60953 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42P60953 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
CDC42P60953 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42P60953 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42P60953 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42P60953 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42P60953 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42P60953 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
CDC42P60953 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42P60953 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CDC42P60953 ACTBP8-201ENST00000403258 1108 ntBASIC13.24□□□□□ -0.29
CDC42P60953 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42P60953 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42P60953 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42P60953 AC241585.1-201ENST00000433527 519 ntBASIC13.24□□□□□ -0.29
CDC42P60953 AC067863.1-201ENST00000494933 530 ntBASIC13.24□□□□□ -0.29
CDC42P60953 AC097493.3-201ENST00000509725 367 ntBASIC13.24□□□□□ -0.29
CDC42P60953 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.24□□□□□ -0.29
CDC42P60953 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.24□□□□□ -0.29
CDC42P60953 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.24□□□□□ -0.29
CDC42P60953 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC13.24□□□□□ -0.29
CDC42P60953 TPRX2P-201ENST00000535362 881 ntBASIC13.24□□□□□ -0.29
CDC42P60953 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CDC42P60953 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.24□□□□□ -0.29
CDC42P60953 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.24□□□□□ -0.29
CDC42P60953 AC138696.2-201ENST00000607376 223 ntBASIC13.24□□□□□ -0.29
CDC42P60953 BX088702.1-201ENST00000610784 235 ntBASIC13.24□□□□□ -0.29
CDC42P60953 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42P60953 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42P60953 LINC02486-201ENST00000604157 3000 ntBASIC13.24□□□□□ -0.29
CDC42P60953 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.24□□□□□ -0.29
CDC42P60953 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42P60953 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42P60953 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CDC42P60953 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.24□□□□□ -0.29
CDC42P60953 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42P60953 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42P60953 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDC42P60953 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42P60953 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42P60953 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CDC42P60953 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42P60953 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42P60953 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CDC42P60953 AP002761.4-201ENST00000565433 3361 ntBASIC13.23□□□□□ -0.29
CDC42P60953 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42P60953 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.23□□□□□ -0.29
CDC42P60953 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CDC42P60953 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC13.23□□□□□ -0.29
CDC42P60953 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.23□□□□□ -0.29
CDC42P60953 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms