Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 AC079776.1-201ENST00000401540 1152 ntBASIC12.81□□□□□ -0.36
CTLA4P16410 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 AC079178.1-201ENST00000420915 656 ntBASIC12.81□□□□□ -0.36
CTLA4P16410 U91328.1-201ENST00000437528 223 ntBASIC12.81□□□□□ -0.36
CTLA4P16410 ST13P19-201ENST00000442505 1124 ntBASIC12.81□□□□□ -0.36
CTLA4P16410 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.81□□□□□ -0.36
CTLA4P16410 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.81□□□□□ -0.36
CTLA4P16410 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC12.81□□□□□ -0.36
CTLA4P16410 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CTLA4P16410 SNX29P1-201ENST00000548357 1007 ntBASIC12.81□□□□□ -0.36
CTLA4P16410 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.81□□□□□ -0.36
CTLA4P16410 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.81□□□□□ -0.36
CTLA4P16410 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.81□□□□□ -0.36
CTLA4P16410 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.81□□□□□ -0.36
CTLA4P16410 Z98259.2-201ENST00000641583 609 ntBASIC12.81□□□□□ -0.36
CTLA4P16410 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.81□□□□□ -0.36
CTLA4P16410 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.81□□□□□ -0.36
CTLA4P16410 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CTLA4P16410 AC015818.8-201ENST00000587907 1519 ntBASIC12.81□□□□□ -0.36
CTLA4P16410 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.81□□□□□ -0.36
CTLA4P16410 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CTLA4P16410 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 AC015909.5-201ENST00000624336 2266 ntBASIC12.81□□□□□ -0.36
CTLA4P16410 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CTLA4P16410 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CTLA4P16410 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CTLA4P16410 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.8□□□□□ -0.36
CTLA4P16410 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.8□□□□□ -0.36
CTLA4P16410 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTLA4P16410 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTLA4P16410 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTLA4P16410 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.8□□□□□ -0.36
CTLA4P16410 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.8□□□□□ -0.36
CTLA4P16410 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CTLA4P16410 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CTLA4P16410 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.8□□□□□ -0.36
CTLA4P16410 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CTLA4P16410 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTLA4P16410 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTLA4P16410 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CTLA4P16410 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
CTLA4P16410 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CTLA4P16410 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CTLA4P16410 MIR1909-201ENST00000411312 80 ntBASIC12.8□□□□□ -0.36
CTLA4P16410 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.8□□□□□ -0.36
CTLA4P16410 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.8□□□□□ -0.36
CTLA4P16410 AC104989.1-201ENST00000519711 778 ntBASIC12.8□□□□□ -0.36
CTLA4P16410 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC12.8□□□□□ -0.36
CTLA4P16410 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTLA4P16410 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.8□□□□□ -0.36
CTLA4P16410 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.8□□□□□ -0.36
CTLA4P16410 MIR4741-201ENST00000579822 90 ntBASIC12.8□□□□□ -0.36
CTLA4P16410 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CTLA4P16410 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CTLA4P16410 AC021016.3-201ENST00000608367 477 ntBASIC12.8□□□□□ -0.36
CTLA4P16410 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.8□□□□□ -0.36
CTLA4P16410 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
CTLA4P16410 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTLA4P16410 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTLA4P16410 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTLA4P16410 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CTLA4P16410 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTLA4P16410 AC079781.5-202ENST00000641784 3743 ntBASIC12.8□□□□□ -0.36
CTLA4P16410 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CTLA4P16410 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.8□□□□□ -0.36
CTLA4P16410 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTLA4P16410 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.8□□□□□ -0.36
CTLA4P16410 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.8□□□□□ -0.36
CTLA4P16410 AC126335.2-201ENST00000623362 4637 ntBASIC12.8□□□□□ -0.36
CTLA4P16410 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CTLA4P16410 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CTLA4P16410 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CTLA4P16410 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.8□□□□□ -0.36
CTLA4P16410 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC12.8□□□□□ -0.36
CTLA4P16410 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CTLA4P16410 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTLA4P16410 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTLA4P16410 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.79□□□□□ -0.36
CTLA4P16410 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
CTLA4P16410 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTLA4P16410 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CTLA4P16410 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTLA4P16410 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CTLA4P16410 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTLA4P16410 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTLA4P16410 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTLA4P16410 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CTLA4P16410 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CTLA4P16410 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTLA4P16410 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.79□□□□□ -0.36
CTLA4P16410 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTLA4P16410 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CTLA4P16410 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.79□□□□□ -0.36
CTLA4P16410 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms